PeakID (cmd=annotatePeaks.pl 21not2-18.bed hg19) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type 21-PTNLD28-NN-CD8CAR_peak_13333 chr2 12263233 12263369 + 33.39292 NA intron (NR_110197, intron 3 of 3) intron (NR_110197, intron 3 of 3) 116059 NR_110196 100506457 Hs.197824 NR_110196 ENSG00000224184 LOC100506457 - uncharacterized LOC100506457 ncRNA 21-PTNLD28-NN-CD8CAR_peak_10023 chr17 975604 975789 + 32.42363 NA intron (NM_001282149, intron 3 of 17) CpG 6690 NM_001282149 29 Hs.159306 NM_001092 HPRD:02649 ABR MDB active BCR-related protein-coding 21-PTNLD28-NN-CD8CAR_peak_25199 chr8 121956069 121956233 + 30.23492 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -131842 NM_021021 6641 Hs.46701 NM_021021 HPRD:02490 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) protein-coding 21-PTNLD28-NN-CD8CAR_peak_27673 chrX 116559564 116559735 + 24.38477 NA Intergenic (TA)n|Simple_repeat|Simple_repeat 548052 NM_033495 90293 Hs.348262 NM_033495 HPRD:06461 KLHL13 BKLHD2 kelch-like family member 13 protein-coding 21-PTNLD28-NN-CD8CAR_peak_479 chr1 31052123 31052235 + 19.17129 NA Intergenic L1PA3|LINE|L1 -139440 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9844 chr16 83064790 83064888 + 17.16903 NA intron (NM_001220490, intron 2 of 12) (CATATA)n|Simple_repeat|Simple_repeat -40936 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24623 chr8 37007729 37007860 + 16.67605 NA Intergenic (CATATA)n|Simple_repeat|Simple_repeat 343637 NR_121620 100507420 Hs.105962 NR_121620 LOC100507420 - uncharacterized LOC100507420 ncRNA 21-PTNLD28-NN-CD8CAR_peak_3420 chr10 39101960 39102041 + 16.44315 NA Intergenic (CATTC)n|Satellite|Satellite 112273 NR_045000 399746 Hs.742607 NR_045000 ENSG00000227264 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 21-PTNLD28-NN-CD8CAR_peak_17549 chr3 93912281 93912409 + 15.93033 NA Intergenic AluYa5|SINE|Alu -130278 NM_001195643 200895 Hs.718516 NM_176815 HPRD:11246 DHFRL1 DHFRP4 dihydrofolate reductase-like 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3404 chr10 39076701 39076788 + 15.65350 NA Intergenic (CATTC)n|Satellite|Satellite 87017 NR_045000 399746 Hs.742607 NR_045000 ENSG00000227264 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 21-PTNLD28-NN-CD8CAR_peak_24517 chr8 22623306 22623447 + 14.74831 NA intron (NM_144962, intron 4 of 6) intron (NM_144962, intron 4 of 6) -72561 NM_004430 1960 Hs.534313 NM_004430 HPRD:03881 EGR3 EGR-3|PILOT early growth response 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14549 chr2 145655255 145655350 + 14.69748 NA intron (NR_033870, intron 2 of 4) L1PA2|LINE|L1 229768 NR_033870 401014 Hs.742290 NR_033870 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_12314 chr19 27737911 27738086 + 14.69728 NA Intergenic ALR/Alpha|Satellite|centr -546377 NR_110688 101927151 Hs.567934 NR_110687 LOC101927151 - uncharacterized LOC101927151 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24493 chr8 21196612 21196796 + 14.56104 NA Intergenic L1PA3|LINE|L1 40954 NR_104677 101929172 Hs.128668 NR_104677 ENSG00000254334 LOC101929172 - uncharacterized LOC101929172 ncRNA 21-PTNLD28-NN-CD8CAR_peak_8800 chr16 531575 531869 + 14.42685 NA intron (NM_001142272, intron 1 of 11) AluJb|SINE|Alu 6872 NM_001142272 9727 Hs.531642 NM_014700 HPRD:18521 RAB11FIP3 CART1|Rab11-FIP3 RAB11 family interacting protein 3 (class II) protein-coding 21-PTNLD28-NN-CD8CAR_peak_15720 chr20 45417500 45417620 + 14.39725 NA Intergenic (TG)n|Simple_repeat|Simple_repeat 79281 NM_030777 81031 Hs.305971 NM_030777 HPRD:05851 SLC2A10 ATS|GLUT10 solute carrier family 2 (facilitated glucose transporter), member 10 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27528 chrX 71901300 71901485 + 14.15955 NA intron (NM_001172436, intron 5 of 29) SVA_F|Other|Other -7407 NR_110391 101928259 Hs.666679 NR_110391 ENSG00000231944 LOC101928259 - uncharacterized LOC101928259 ncRNA 21-PTNLD28-NN-CD8CAR_peak_28140 chrY 28807257 28807353 + 14.14720 NA Intergenic (GAGTG)n|Simple_repeat|Simple_repeat 932668 NR_002176 474148 Hs.511777 NR_002176 TTTY3B LNCRNA00122|NCRNA00122 testis-specific transcript, Y-linked 3B (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_7268 chr13 113494529 113494653 + 13.94473 NA intron (NM_032189, intron 16 of 28) C-rich|Low_complexity|Low_complexity -85546 NR_046661 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_1093 chr1 80874174 80874283 + 13.92432 NA Intergenic L1PA3|LINE|L1 -1291227 NM_001297704 23266 Hs.24212 NM_012302 HPRD:06116 LPHN2 CIRL2|CL2|LEC1|LPHH1 latrophilin 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_9672 chr16 67255389 67255502 + 13.90167 NA intron (NM_001004055, intron 2 of 6) AluY|SINE|Alu 5276 NM_012163 26231 Hs.461000 NM_012163 HPRD:14317 LRRC29 FBL9|FBXL9 leucine rich repeat containing 29 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27399 chrX 58544805 58544904 + 13.77789 NA Intergenic ALR/Alpha|Satellite|centr -607787 NM_007156 7789 Hs.550094 NM_007156 HPRD:02210 ZXDA ZNF896 zinc finger, X-linked, duplicated A protein-coding 21-PTNLD28-NN-CD8CAR_peak_2412 chr1 195011984 195012094 + 13.58475 NA Intergenic L1PA4|LINE|L1 1539572 NR_039888 100616363 NR_039888 MIR4735 - microRNA 4735 ncRNA 21-PTNLD28-NN-CD8CAR_peak_10866 chr17 61092834 61092932 + 13.58475 NA intron (NM_025185, intron 1 of 24) L1PA5|LINE|L1 5985 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_110 chr1 4999626 4999730 + 13.58475 NA Intergenic Intergenic 284573 NM_018836 55966 Hs.25924 NM_018836 HPRD:15339 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_5953 chr12 34831693 34831805 + 13.47640 NA Intergenic ALR/Alpha|Satellite|centr 656533 NM_032834 84920 Hs.102971 NM_032834 ALG10 ALG10A|DIE2|KCR1 ALG10, alpha-1,2-glucosyltransferase protein-coding 21-PTNLD28-NN-CD8CAR_peak_9554 chr16 51048792 51048893 + 13.43501 NA Intergenic Intergenic -2827 NR_110913 101927334 Hs.555184 NR_110913 LOC101927334 - uncharacterized LOC101927334 ncRNA 21-PTNLD28-NN-CD8CAR_peak_12332 chr19 27814331 27814473 + 13.28709 NA Intergenic ALR/Alpha|Satellite|centr -469973 NR_110688 101927151 Hs.567934 NR_110687 LOC101927151 - uncharacterized LOC101927151 ncRNA 21-PTNLD28-NN-CD8CAR_peak_19741 chr4 188912168 188912269 + 13.26464 NA Intergenic SVA_D|Other|Other -4707 NM_174900 132625 Hs.335787 NM_174900 HPRD:15726 ZFP42 REX1|ZNF754 ZFP42 zinc finger protein protein-coding 21-PTNLD28-NN-CD8CAR_peak_6835 chr12 129502528 129502905 + 13.20042 NA Intergenic Intergenic -91519 NR_104173 283352 Hs.665667 NR_104172 ENSG00000249196 LOC283352 - uncharacterized LOC283352 ncRNA 21-PTNLD28-NN-CD8CAR_peak_19732 chr4 187467961 187468217 + 13.14976 NA intron (NM_005958, intron 1 of 1) intron (NM_005958, intron 1 of 1) 8448 NM_005958 4543 Hs.243467 NM_005958 HPRD:02812 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding 21-PTNLD28-NN-CD8CAR_peak_27028 chrUn_gl000225 196413 196500 + 13.14393 NA NA (GAATG)n|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_3543 chr10 42815113 42815218 + 13.14336 NA Intergenic (CATTC)n|Satellite|Satellite 48328 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_3445 chr10 39150503 39150612 + 13.13935 NA Intergenic (GAATG)n|Satellite|Satellite 160830 NR_045000 399746 Hs.742607 NR_045000 ENSG00000227264 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 21-PTNLD28-NN-CD8CAR_peak_13164 chr19_gl000208_random 64741 64935 + 13.06164 NA NA ALR/Alpha|Satellite|centr NA NA 21-PTNLD28-NN-CD8CAR_peak_4694 chr11 48948415 48948518 + 12.97798 NA Intergenic ALR/Alpha|Satellite|centr -104686 NM_001206626 283116 Hs.448644 NM_001206626 ENSG00000182053 TRIM49B - tripartite motif containing 49B protein-coding 21-PTNLD28-NN-CD8CAR_peak_6385 chr12 73739842 73739949 + 12.97301 NA Intergenic L1PA7|LINE|L1 186925 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LOC101928137 - uncharacterized LOC101928137 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24028 chr7 139650475 139650621 + 12.97301 NA intron (NR_029394, intron 5 of 12) C-rich|Low_complexity|Low_complexity 112973 NM_022750 64761 Hs.12646 NM_022750 HPRD:15696 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly (ADP-ribose) polymerase family, member 12 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16715 chr22 39607822 39607938 + 12.83992 NA Intergenic AluYb8|SINE|Alu 29034 NM_033016 5155 Hs.1976 NM_002608 HPRD:01815 PDGFB IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis platelet-derived growth factor beta polypeptide protein-coding 21-PTNLD28-NN-CD8CAR_peak_11662 chr19 602192 602329 + 12.66069 NA intron (NM_001194, intron 1 of 7) TAR1|Satellite|telo 12367 NM_001194 610 Hs.124161 NM_001194 HPRD:07213 HCN2 BCNG-2|BCNG2|HAC-1 hyperpolarization activated cyclic nucleotide-gated potassium channel 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_22732 chr6 169240586 169240793 + 12.54412 NA Intergenic (ATG)n|Simple_repeat|Simple_repeat 398858 NM_001166412 64094 Hs.487200 NM_022138 HPRD:06244 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_24888 chr8 69657930 69658044 + 12.53980 NA intron (NM_052958, intron 10 of 13) L1PA3|LINE|L1 358438 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LOC100505718 - uncharacterized LOC100505718 ncRNA 21-PTNLD28-NN-CD8CAR_peak_26694 chr9_gl000199_random 15362 15448 + 12.47674 NA NA ALR/Alpha|Satellite|centr NA NA 21-PTNLD28-NN-CD8CAR_peak_5925 chr12 30780446 30780546 + 12.44231 NA Intergenic L1PA2|LINE|L1 49682 NM_001190995 10526 Hs.505136 NM_006390 HPRD:09282 IPO8 RANBP8 importin 8 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14383 chr2 126492267 126492388 + 12.44231 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -921184 NM_001256584 2995 Hs.59138 NM_002101 HPRD:00193 GYPC CD236|CD236R|GE|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding 21-PTNLD28-NN-CD8CAR_peak_14635 chr2 161911020 161911106 + 12.44231 NA Intergenic AluSz|SINE|Alu -82403 NM_133484 10010 Hs.132257 NM_004180 HPRD:04870 TANK I-TRAF|ITRAF|TRAF2 TRAF family member-associated NFKB activator protein-coding 21-PTNLD28-NN-CD8CAR_peak_7089 chr13 55606585 55606710 + 12.44231 NA Intergenic AluY|SINE|Alu -141942 NR_049804 100846996 NR_049804 miRBase:MI0017874 MIR5007 - microRNA 5007 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24413 chr8 7834518 7834627 + 12.42580 NA exon (NM_001256871, exon 1 of 1) exon (NM_001256871, exon 1 of 1) 935 NM_001256871 645836 Hs.741131 NM_001256871 USP17L3 USP17B|USP17F ubiquitin specific peptidase 17-like family member 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25377 chr8 139219021 139219139 + 12.37578 NA intron (NM_015912, intron 7 of 19) intron (NM_015912, intron 7 of 19) 289985 NM_015912 51059 Hs.126024 NM_015912 HPRD:14230 FAM135B C8ORFK32 family with sequence similarity 135, member B protein-coding 21-PTNLD28-NN-CD8CAR_peak_15455 chr20 29821427 29821534 + 12.34060 NA Intergenic (GAATG)n|Satellite|Satellite -23987 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin, beta 115 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26029 chr9 72451694 72451837 + 12.29410 NA intron (NM_001010940, intron 1 of 5) L1PA3|LINE|L1 16034 NM_001010940 138255 Hs.444459 NM_001010940 HPRD:17298 C9orf135 - chromosome 9 open reading frame 135 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16520 chr22 22643137 22643366 + 12.13312 NA Intergenic G-rich|Low_complexity|Low_complexity -9212 NR_027293 96610 Hs.449601 NM_080926 HPRD:14302 BMS1P20 - BMS1 pseudogene 20 pseudo 21-PTNLD28-NN-CD8CAR_peak_11320 chr18 18511995 18512080 + 12.10458 NA Intergenic ALR/Alpha|Satellite|centr 179775 NM_005406 6093 Hs.306307 NM_005406 ROCK1 P160ROCK|ROCK-I Rho-associated, coiled-coil containing protein kinase 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3910 chr10 94134918 94135053 + 12.00955 NA Intergenic SVA_A|Other|Other -43433 NR_038243 100507674 Hs.568772 NR_038243 MARK2P9 - MAP/microtubule affinity-regulating kinase 2 pseudogene 9 pseudo 21-PTNLD28-NN-CD8CAR_peak_2394 chr1 189531538 189531633 + 11.98257 NA Intergenic (TATAA)n|Simple_repeat|Simple_repeat 915174 NM_199051 339479 Hs.65765 NM_199051 HPRD:16782 BRINP3 DBCCR1L|DBCCR1L1|FAM5C bone morphogenetic protein/retinoic acid inducible neural-specific 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4287 chr11 1079232 1079354 + 11.85941 NA intron (NM_002457, intron 6 of 49) intron (NM_002457, intron 6 of 49) 4418 NM_002457 4583 Hs.315 NM_002457 HPRD:11828 MUC2 MLP|MUC-2|SMUC mucin 2, oligomeric mucus/gel-forming protein-coding 21-PTNLD28-NN-CD8CAR_peak_10017 chr17 744667 744849 + 11.85941 NA intron (NM_022463, intron 1 of 7) CpG 22593 NM_001205319 64359 Hs.527989 NM_022463 HPRD:14858 NXN NRX|TRG-4 nucleoredoxin protein-coding 21-PTNLD28-NN-CD8CAR_peak_23205 chr7 57711357 57711576 + 11.84655 NA Intergenic SST1|Satellite|centr 201583 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding 21-PTNLD28-NN-CD8CAR_peak_13502 chr2 32336153 32336286 + 11.84166 NA intron (NM_014946, intron 4 of 16) (TA)n|Simple_repeat|Simple_repeat 47539 NM_014946 6683 Hs.468091 NM_014946 HPRD:05044 SPAST ADPSP|FSP2|SPG4 spastin protein-coding 21-PTNLD28-NN-CD8CAR_peak_22162 chr6 71975187 71975286 + 11.84166 NA Intergenic SVA_D|Other|Other -23241 NM_024576 79627 Hs.648434 NM_024576 OGFRL1 dJ331H24.1 opioid growth factor receptor-like 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16060 chr21 10859485 10859582 + 11.76096 NA Intergenic (GAATG)n|Satellite|Satellite 131410 NM_001290224 7179 Hs.122986 NM_199259 HPRD:05064 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding 21-PTNLD28-NN-CD8CAR_peak_5981 chr12 38030839 38030925 + 11.75385 NA Intergenic ALR/Alpha|Satellite|centr -679675 NM_001013620 144245 Hs.259305 NM_001013620 ALG10B ALG10|KCR1 ALG10B, alpha-1,2-glucosyltransferase protein-coding 21-PTNLD28-NN-CD8CAR_peak_14469 chr2 133028331 133028449 + 11.68255 NA Intergenic Intergenic -12848 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo 21-PTNLD28-NN-CD8CAR_peak_26988 chrUn_gl000225 101300 101385 + 11.67919 NA NA BSR/Beta|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_26840 chrUn_gl000216 62869 62950 + 11.66817 NA NA (CATTC)n|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_15429 chr20 26272531 26272622 + 11.64130 NA Intergenic ALR/Alpha|Satellite|centr -82707 NR_040095 284801 Hs.370699 NR_040095 ENSG00000227195 MIR663AHG - MIR663A host gene (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_26935 chrUn_gl000225 19005 19112 + 11.62241 NA NA BSR/Beta|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_4305 chr11 1961101 1961205 + 11.47890 NA Intergenic Intergenic -7349 NM_021134 6150 Hs.3254 NM_021134 HPRD:02876 MRPL23 L23MRP|RPL23|RPL23L mitochondrial ribosomal protein L23 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26993 chrUn_gl000225 107667 107753 + 11.41571 NA NA BSR/Beta|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_19003 chr4 49635394 49635494 + 11.37227 NA Intergenic (GAATG)n|Satellite|Satellite 646785 NM_001286791 80157 Hs.479703 NM_025087 HPRD:08638 CWH43 CWH43-C cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_28164 chrY 58905256 58905343 + 11.32167 NA Intergenic (CATTC)n|Satellite|Satellite -195158 NM_005840 10251 Hs.381912 NM_005840 HPRD:03917 SPRY3 HSPRY3|spry-3 sprouty homolog 3 (Drosophila) protein-coding 21-PTNLD28-NN-CD8CAR_peak_1543 chr1 144170335 144170443 + 11.32167 NA intron (NM_001278267, intron 11 of 130) intron (NM_001278267, intron 11 of 130) 23578 NM_001278267 100288142 Hs.445080 NM_001278267 ENSG00000203832 NBPF20 - neuroblastoma breakpoint family, member 20 protein-coding 21-PTNLD28-NN-CD8CAR_peak_28112 chrY 28161560 28161649 + 11.32167 NA Intergenic L1PA5|LINE|L1 286967 NR_002176 474148 Hs.511777 NR_002176 TTTY3B LNCRNA00122|NCRNA00122 testis-specific transcript, Y-linked 3B (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_7993 chr14 97175309 97175575 + 11.30802 NA Intergenic (TGG)n|Simple_repeat|Simple_repeat -88242 NM_003384 7443 Hs.422662 NM_003384 HPRD:03701 VRK1 PCH1|PCH1A vaccinia related kinase 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4212 chr10 134479025 134479163 + 11.30746 NA intron (NM_005539, intron 4 of 15) AluJo|SINE|Alu 120443 NM_177400 84504 Hs.134013 NM_177400 HPRD:09336 NKX6-2 GTX|NKX6.2|NKX6B NK6 homeobox 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4292 chr11 1444925 1445046 + 11.29689 NA intron (NM_001256630, intron 1 of 19) intron (NM_001256630, intron 1 of 19) 12603 NM_001256630 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4680 chr11 48855091 48855172 + 11.27882 NA Intergenic ALR/Alpha|Satellite|centr -198021 NM_001206626 283116 Hs.448644 NM_001206626 ENSG00000182053 TRIM49B - tripartite motif containing 49B protein-coding 21-PTNLD28-NN-CD8CAR_peak_6798 chr12 124923374 124923544 + 11.24264 NA intron (NM_001077261, intron 9 of 47) GA-rich|Low_complexity|Low_complexity -101671 NR_106940 102466204 NR_106940 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA 21-PTNLD28-NN-CD8CAR_peak_28033 chrY 13703530 13703640 + 11.14886 NA Intergenic (GAATG)n|Satellite|Satellite 829804 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_26629 chr9 139678057 139678158 + 10.97255 NA Intergenic AluY|SINE|Alu -7670 NM_032928 85014 Hs.356744 NM_032928 HPRD:17490 TMEM141 - transmembrane protein 141 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19619 chr4 159668208 159668323 + 10.97255 NA Intergenic SVA_D|Other|Other -21917 NM_020840 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18541 chr3 197596577 197596751 + 10.89203 NA intron (NM_032773, intron 17 of 18) intron (NM_032773, intron 17 of 18) 78519 NM_032773 84859 Hs.518414 NM_032773 HPRD:14308 LRCH3 - leucine-rich repeats and calponin homology (CH) domain containing 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_17554 chr3 95502950 95503080 + 10.84542 NA Intergenic (CATATA)n|Simple_repeat|Simple_repeat -100978 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_19068 chr4 58435104 58435235 + 10.81103 NA Intergenic L1PA6|LINE|L1 -458618 NM_001253835 3490 Hs.479808 NM_001553 HPRD:04183 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin-like growth factor binding protein 7 protein-coding 21-PTNLD28-NN-CD8CAR_peak_15458 chr20 29825180 29825265 + 10.78194 NA Intergenic (GAATG)n|Satellite|Satellite -20245 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin, beta 115 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26234 chr9 99985955 99986040 + 10.77231 NA Intergenic L1MB4|LINE|L1 -14711 NR_036527 57653 Hs.435629 NR_036527 LOC100499484-C9ORF174 - LOC100499484-C9orf174 readthrough ncRNA 21-PTNLD28-NN-CD8CAR_peak_11283 chr18 13262249 13262552 + 10.76580 NA intron (NM_181482, intron 1 of 5) CpG -15704 NM_181481 753 Hs.731853 NM_004338 HPRD:07358 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6390 chr12 73792859 73792962 + 10.66327 NA Intergenic L1PA2|LINE|L1 239940 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LOC101928137 - uncharacterized LOC101928137 ncRNA 21-PTNLD28-NN-CD8CAR_peak_16019 chr21 10777649 10777740 + 10.65502 NA Intergenic (GAATG)n|Satellite|Satellite 213249 NM_001290224 7179 Hs.122986 NM_199259 HPRD:05064 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding 21-PTNLD28-NN-CD8CAR_peak_6415 chr12 83293889 83293973 + 10.58318 NA intron (NM_152588, intron 3 of 11) (TA)n|Simple_repeat|Simple_repeat 212997 NM_152588 160335 Hs.577775 NM_152588 HPRD:13230 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3426 chr10 39109216 39109302 + 10.54777 NA Intergenic (CATTC)n|Satellite|Satellite 119532 NR_045000 399746 Hs.742607 NR_045000 ENSG00000227264 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 21-PTNLD28-NN-CD8CAR_peak_28131 chrY 28798946 28799031 + 10.52670 NA Intergenic (GAGTG)n|Simple_repeat|Simple_repeat 924351 NR_002176 474148 Hs.511777 NR_002176 TTTY3B LNCRNA00122|NCRNA00122 testis-specific transcript, Y-linked 3B (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_7292 chr13 114477979 114478114 + 10.50141 NA intron (NM_182614, intron 3 of 8) (CA)n|Simple_repeat|Simple_repeat 15830 NM_182614 348013 Hs.280805 NM_182614 HPRD:14474 TMEM255B FAM70B transmembrane protein 255B protein-coding 21-PTNLD28-NN-CD8CAR_peak_24440 chr8 11990509 11990609 + 10.49871 NA exon (NM_001256869, exon 1 of 1) exon (NM_001256869, exon 1 of 1) 959 NM_001256869 392197 Hs.741132 NM_001256869 USP17L7 - ubiquitin specific peptidase 17-like family member 7 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26966 chrUn_gl000225 70830 70944 + 10.49203 NA NA BSR/Beta|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_19 chr1 724470 724560 + 10.48794 NA Intergenic (GAATG)n|Satellite|Satellite -10447 NR_033908 100288069 Hs.527521 NR_033908 ENSG00000228327 LOC100288069 - uncharacterized LOC100288069 ncRNA 21-PTNLD28-NN-CD8CAR_peak_6863 chr12 133040841 133040949 + 10.45955 NA Intergenic (CAT)n|Simple_repeat|Simple_repeat -26262 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin-like 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4189 chr10 131893447 131893557 + 10.45653 NA intron (NR_034125, intron 3 of 7) L1PA7|LINE|L1 -10771 NR_044994 119437 Hs.620802 NR_044994 ENSG00000233122 CTAGE7P CTAGE7|CTAGEP|bA500G10.2|rcCTAGE5 CTAGE family, member 7, pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_15937 chr20 61699871 61700084 + 10.37355 NA intron (NR_033370, intron 1 of 4) intron (NR_033370, intron 1 of 4) 30614 NR_033369 100144597 Hs.636485 NR_033369 ENSG00000237119 LINC01056 - long intergenic non-protein coding RNA 1056 ncRNA 21-PTNLD28-NN-CD8CAR_peak_15435 chr20 26313001 26313083 + 10.34385 NA Intergenic ALR/Alpha|Satellite|centr -123173 NR_040095 284801 Hs.370699 NR_040095 ENSG00000227195 MIR663AHG - MIR663A host gene (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_26969 chrUn_gl000225 74463 74585 + 10.33819 NA NA BSR/Beta|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_28 chr1 802130 802292 + 10.31473 NA Intergenic CpG 9971 NR_027055 284593 Hs.449006 NR_027055 ENSG00000230368 FAM41C - family with sequence similarity 41, member C ncRNA 21-PTNLD28-NN-CD8CAR_peak_24392 chr8 7190780 7190888 + 10.31473 NA exon (NM_001256873, exon 1 of 1) exon (NM_001256873, exon 1 of 1) 925 NM_001256873 401447 Hs.653091 NM_001256873 USP17L1P USP17L1 ubiquitin specific peptidase 17-like family member 1, pseudogene protein-coding 21-PTNLD28-NN-CD8CAR_peak_12675 chr19 44914868 44915028 + 10.31447 NA Intergenic ACRO1|Satellite|acro -9171 NM_001291489 26974 Hs.709428 NM_152354 HPRD:15759 ZNF285 ZNF285A zinc finger protein 285 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26868 chrUn_gl000216 165916 166016 + 10.31027 NA NA BSR/Beta|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_10151 chr17 7303913 7303995 + 10.23044 NA intron (NR_037719, intron 2 of 9) AluY|SINE|Alu 3496 NR_037719 100529211 Hs.534591 NR_037719 TMEM256-PLSCR3 C17orf61-PLSCR3 TMEM256-PLSCR3 readthrough (NMD candidate) ncRNA 21-PTNLD28-NN-CD8CAR_peak_4611 chr11 42481187 42481272 + 10.22545 NA Intergenic L1PA3|LINE|L1 -205989 NR_038309 100507205 Hs.99310 NR_038309 LOC100507205 - uncharacterized LOC100507205 ncRNA 21-PTNLD28-NN-CD8CAR_peak_19227 chr4 87550009 87550098 + 10.22545 NA intron (NM_080685, intron 1 of 47) L1HS|LINE|L1 34585 NM_080685 5783 Hs.436142 NM_006264 HPRD:02602 PTPN13 FAP-1|PNP1|PTP-BAS|PTP-BL|PTP1E|PTPL1|PTPLE|hPTP1E protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) protein-coding 21-PTNLD28-NN-CD8CAR_peak_3327 chr10 32885718 32885800 + 10.22545 NA intron (NM_024688, intron 3 of 22) L1PA5|LINE|L1 29108 NM_024688 79741 Hs.585464 NM_024688 HPRD:10698 CCDC7 BioT2-A|BioT2-B|BioT2-C|C10orf68 coiled-coil domain containing 7 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19082 chr4 60124552 60124633 + 10.22545 NA Intergenic AluY|SINE|Alu -2148041 NM_001253835 3490 Hs.479808 NM_001553 HPRD:04183 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin-like growth factor binding protein 7 protein-coding 21-PTNLD28-NN-CD8CAR_peak_28187 chrY 59119991 59120079 + 10.22545 NA Intergenic L1PA3|LINE|L1 19578 NM_005840 10251 Hs.381912 NM_005840 HPRD:03917 SPRY3 HSPRY3|spry-3 sprouty homolog 3 (Drosophila) protein-coding 21-PTNLD28-NN-CD8CAR_peak_27572 chrX 78248746 78249031 + 10.22545 NA Intergenic L1PA3|LINE|L1 48059 NM_014499 27334 Hs.296433 NM_014499 HPRD:06670 P2RY10 LYPSR2|P2Y10 purinergic receptor P2Y, G-protein coupled, 10 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3899 chr10 93216332 93216459 + 10.22545 NA intron (NR_104291, intron 2 of 20) L1PA5|LINE|L1 46353 NM_182765 143279 Hs.596096 NM_173497 HPRD:13643 HECTD2 - HECT domain containing E3 ubiquitin protein ligase 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19420 chr4 122095015 122095105 + 10.22545 NA intron (NM_001128843, intron 3 of 12) AluSz|SINE|Alu -9565 NM_024873 79931 Hs.208206 NM_024873 HPRD:16268 TNIP3 ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_13354 chr2 18937247 18937466 + 10.22545 NA Intergenic Intergenic -166510 NM_001199088 93034 Hs.744358 NM_033253 HPRD:11405 NT5C1B AIRP|CN-IB|CN1B 5'-nucleotidase, cytosolic IB protein-coding 21-PTNLD28-NN-CD8CAR_peak_20917 chr5 147589946 147590031 + 10.22545 NA intron (NM_205841, intron 2 of 3) (TA)n|Simple_repeat|Simple_repeat 7631 NM_205841 404203 Hs.334274 NM_205841 HPRD:15439 SPINK6 BUSI2|UNQ844 serine peptidase inhibitor, Kazal type 6 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27875 chrX 155016985 155017073 + 10.22545 NA Intergenic L1PA3|LINE|L1 19578 NM_005840 10251 Hs.381912 NM_005840 HPRD:03917 SPRY3 HSPRY3|spry-3 sprouty homolog 3 (Drosophila) protein-coding 21-PTNLD28-NN-CD8CAR_peak_13359 chr2 20032856 20032954 + 10.22545 NA Intergenic L1PA2|LINE|L1 -35710 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA 21-PTNLD28-NN-CD8CAR_peak_27944 chrY 13122053 13122136 + 10.20927 NA Intergenic ALR/Alpha|Satellite|centr 1411295 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_27008 chrUn_gl000225 125863 125987 + 10.18212 NA NA BSR/Beta|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_25900 chr9 66803865 66803956 + 10.14282 NA Intergenic ALR/Alpha|Satellite|centr -119057 NR_121570 101928381 Hs.708686 NR_121570 LOC101928381 - uncharacterized LOC101928381 ncRNA 21-PTNLD28-NN-CD8CAR_peak_16109 chr21 24519024 24519118 + 10.13371 NA Intergenic L1PA3|LINE|L1 238085 NR_040254 266917 Hs.145622 NR_040254 ENSG00000228592 D21S2088E - D21S2088E ncRNA 21-PTNLD28-NN-CD8CAR_peak_23211 chr7 57959697 57959793 + 10.13028 NA Intergenic ALR/Alpha|Satellite|centr 449862 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding 21-PTNLD28-NN-CD8CAR_peak_13235 chr2 2796529 2796800 + 10.06490 NA Intergenic Intergenic 333134 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA 21-PTNLD28-NN-CD8CAR_peak_3373 chr10 38780331 38780412 + 10.03851 NA Intergenic (GAATG)n|Satellite|Satellite 63297 NR_024497 399744 Hs.497951 NM_001013665 LINC00999 - long intergenic non-protein coding RNA 999 ncRNA 21-PTNLD28-NN-CD8CAR_peak_27937 chrY 10098466 10098547 + 9.98740 NA Intergenic ALR/Alpha|Satellite|centr 350099 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_10106 chr17 6321729 6321846 + 9.97781 NA Intergenic AluSp|SINE|Alu 16665 NM_001285402 23746 Hs.279887 NM_014336 HPRD:05092 AIPL1 AIPL2|LCA4 aryl hydrocarbon receptor interacting protein-like 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26848 chrUn_gl000216 135944 136024 + 9.95820 NA NA BSR/Beta|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_8546 chr15 72721212 72721293 + 9.94835 NA Intergenic L1PA5|LINE|L1 30584 NM_001080462 338949 Hs.446069 NM_001080462 TMEM202 - transmembrane protein 202 protein-coding 21-PTNLD28-NN-CD8CAR_peak_8474 chr15 65091823 65092045 + 9.93901 NA Intergenic SVA_D|Other|Other -24164 NM_194272 348093 Hs.436518 NM_194272 HPRD:18601 RBPMS2 - RNA binding protein with multiple splicing 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_2614 chr1 212493365 212493452 + 9.90575 NA intron (NM_001199756, intron 1 of 12) SVA_D|Other|Other 18260 NM_001199756 5525 Hs.744012 NM_006243 HPRD:03384 PPP2R5A B56A|PR61A protein phosphatase 2, regulatory subunit B', alpha protein-coding 21-PTNLD28-NN-CD8CAR_peak_19644 chr4 169077001 169077120 + 9.90106 NA intron (NM_007193, intron 3 of 11) (TA)n|Simple_repeat|Simple_repeat 63372 NM_007193 11199 Hs.188401 NM_007193 HPRD:09724 ANXA10 ANX14 annexin A10 protein-coding 21-PTNLD28-NN-CD8CAR_peak_20777 chr5 137023162 137023273 + 9.86280 NA intron (NM_001257194, intron 5 of 14) SVA_E|Other|Other 18899 NM_001257195 26249 Hs.655084 NM_017415 HPRD:09011 KLHL3 PHA2D kelch-like family member 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26749 chr9_gl000199_random 129713 129810 + 9.82855 NA NA ALR/Alpha|Satellite|centr NA NA 21-PTNLD28-NN-CD8CAR_peak_25896 chr9 66797678 66797771 + 9.82537 NA Intergenic ALR/Alpha|Satellite|centr -125243 NR_121570 101928381 Hs.708686 NR_121570 LOC101928381 - uncharacterized LOC101928381 ncRNA 21-PTNLD28-NN-CD8CAR_peak_28084 chrY 13856673 13856754 + 9.81375 NA Intergenic (GAATG)n|Satellite|Satellite 676676 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_12377 chr19 33233212 33233296 + 9.78229 NA intron (NM_001110822, intron 3 of 12) AluSq|SINE|Alu 22575 NM_001110822 91646 Hs.646351 NM_001015890 ENSG00000173809 TDRD12 ECAT8 tudor domain containing 12 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16016 chr21 10764178 10764258 + 9.77083 NA Intergenic ALR/Alpha|Satellite|centr 226725 NM_001290224 7179 Hs.122986 NM_199259 HPRD:05064 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding 21-PTNLD28-NN-CD8CAR_peak_6260 chr12 61396960 61397048 + 9.75098 NA Intergenic L1HS|LINE|L1 1189616 NM_178539 338811 Hs.269745 NM_178539 HPRD:16876 FAM19A2 TAFA-2|TAFA2 family with sequence similarity 19 (chemokine (C-C motif)-like), member A2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11615 chr18 76277677 76277789 + 9.69638 NA Intergenic CpG -462542 NM_171999 27164 Hs.700557 NM_171999 SALL3 ZNF796 spalt-like transcription factor 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3519 chr10 42616032 42616180 + 9.66619 NA Intergenic Intergenic 247387 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_17540 chr3 93505059 93505156 + 9.65560 NA Intergenic ALR/Alpha|Satellite|centr 187827 NM_000313 5627 Hs.64016 NM_000313 HPRD:01473 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S (alpha) protein-coding 21-PTNLD28-NN-CD8CAR_peak_25994 chr9 69998273 69998362 + 9.64142 NA Intergenic ALR/Alpha|Satellite|centr 180498 NM_001126334 653427 Hs.714683 NM_001126334 ENSG00000204779 FOXD4L5 bA15J10.2 forkhead box D4-like 5 protein-coding 21-PTNLD28-NN-CD8CAR_peak_5393 chr11 113734556 113734650 + 9.64023 NA intron (NM_020886, intron 1 of 24) AluY|SINE|Alu 11689 NM_001301029 57646 Hs.503891 NM_020886 HPRD:15632 USP28 - ubiquitin specific peptidase 28 protein-coding 21-PTNLD28-NN-CD8CAR_peak_17545 chr3 93512851 93512931 + 9.62730 NA Intergenic ALR/Alpha|Satellite|centr 180043 NM_000313 5627 Hs.64016 NM_000313 HPRD:01473 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S (alpha) protein-coding 21-PTNLD28-NN-CD8CAR_peak_12390 chr19 33845785 33845904 + 9.61466 NA Intergenic AluY|SINE|Alu -18731 NM_001806 1054 Hs.429666 NM_001806 HPRD:00738 CEBPG GPE1BP|IG/EBP-1 CCAAT/enhancer binding protein (C/EBP), gamma protein-coding 21-PTNLD28-NN-CD8CAR_peak_14022 chr2 90518659 90518781 + 9.58686 NA Intergenic G-rich|Low_complexity|Low_complexity 1329255 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_6383 chr12 73699719 73699824 + 9.56994 NA Intergenic L1PA3|LINE|L1 146801 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LOC101928137 - uncharacterized LOC101928137 ncRNA 21-PTNLD28-NN-CD8CAR_peak_15422 chr20 25844274 25844362 + 9.56865 NA Intergenic SST1|Satellite|centr -9661 NR_110001 101926935 Hs.737440 NR_110001 LOC101926935 - uncharacterized LOC101926935 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25385 chr8 140949080 140949334 + 9.55692 NA intron (NM_031466, intron 19 of 22) intron (NM_031466, intron 19 of 22) -233908 NM_001282534 51305 Hs.493037 NM_001282534 HPRD:16167 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium channel, subfamily K, member 9 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18289 chr3 180143927 180144007 + 9.53155 NA Intergenic L1PA3|LINE|L1 -175951 NM_133462 151613 Hs.43213 NM_133462 HPRD:15579 TTC14 DRDL5813|PRO19630 tetratricopeptide repeat domain 14 protein-coding 21-PTNLD28-NN-CD8CAR_peak_22569 chr6 148714387 148714482 + 9.53155 NA intron (NM_015278, intron 2 of 19) AluSp|SINE|Alu 50705 NM_015278 23328 Hs.193133 NM_015278 HPRD:06408 SASH1 SH3D6A|dJ323M4|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26808 chrUn_gl000214 136736 136827 + 9.52711 NA NA ACRO1|Satellite|acro NA NA 21-PTNLD28-NN-CD8CAR_peak_28019 chrY 13658780 13658860 + 9.48295 NA Intergenic (GAATG)n|Satellite|Satellite 874569 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_4521 chr11 27526773 27526884 + 9.43783 NA intron (NM_018362, intron 1 of 4) AluSx|SINE|Alu 1498 NM_018362 55327 Hs.91393 NM_018362 HPRD:17279 LIN7C LIN-7-C|LIN-7C|MALS-3|MALS3|VELI3 lin-7 homolog C (C. elegans) protein-coding 21-PTNLD28-NN-CD8CAR_peak_14470 chr2 133043857 133044016 + 9.37550 NA Intergenic Intergenic -28394 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo 21-PTNLD28-NN-CD8CAR_peak_16031 chr21 10799036 10799131 + 9.36727 NA Intergenic (GAATG)n|Satellite|Satellite 191860 NM_001290224 7179 Hs.122986 NM_199259 HPRD:05064 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding 21-PTNLD28-NN-CD8CAR_peak_24250 chr7 155127779 155127875 + 9.36415 NA Intergenic Intergenic 32801 NR_103545 338436 Hs.521326 NR_103545 ENSG00000204960 BLACE - B-cell acute lymphoblastic leukemia expressed ncRNA 21-PTNLD28-NN-CD8CAR_peak_343 chr1 24164007 24164115 + 9.35503 NA Intergenic Intergenic -12112 NM_001166059 3155 Hs.533444 NM_000191 HPRD:02003 HMGCL HL 3-hydroxymethyl-3-methylglutaryl-CoA lyase protein-coding 21-PTNLD28-NN-CD8CAR_peak_7313 chr14 19009461 19009565 + 9.33899 NA Intergenic ALR/Alpha|Satellite|centr -368081 NM_001013354 440153 Hs.534880 NM_001013354 HPRD:18633 OR11H12 - olfactory receptor, family 11, subfamily H, member 12 protein-coding 21-PTNLD28-NN-CD8CAR_peak_7300 chr13 114891395 114891655 + 9.30268 NA intron (NM_007368, intron 1 of 23) intron (NM_007368, intron 1 of 23) 6570 NM_007368 22821 Hs.593075 NM_007368 HPRD:05537 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_12391 chr19 33863655 33863789 + 9.30268 NA promoter-TSS (NM_001806) promoter-TSS (NM_001806) -853 NM_001806 1054 Hs.429666 NM_001806 HPRD:00738 CEBPG GPE1BP|IG/EBP-1 CCAAT/enhancer binding protein (C/EBP), gamma protein-coding 21-PTNLD28-NN-CD8CAR_peak_17494 chr3 75903036 75903139 + 9.29804 NA Intergenic Intergenic -68353 NM_001290210 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 X17|ZNF838 zinc finger protein 717 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19765 chr4 190598224 190598422 + 9.29035 NA Intergenic Intergenic 17563 NR_121679 101928971 Hs.519164 NR_121679 ENSG00000250739 LINC01262 TCONS_l2_00021807 long intergenic non-protein coding RNA 1262 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25376 chr8 139218518 139218878 + 9.28487 NA intron (NM_015912, intron 7 of 19) intron (NM_015912, intron 7 of 19) 290367 NM_015912 51059 Hs.126024 NM_015912 HPRD:14230 FAM135B C8ORFK32 family with sequence similarity 135, member B protein-coding 21-PTNLD28-NN-CD8CAR_peak_23116 chr7 45850695 45850870 + 9.25759 NA Intergenic Intergenic -42165 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPT7P2 SEPT13|SEPT7B septin 7 pseudogene 2 pseudo 21-PTNLD28-NN-CD8CAR_peak_14653 chr2 165528961 165529044 + 9.22063 NA Intergenic AluYb8|SINE|Alu 15285 NR_033309 100337591 Hs.664357 NR_033309 SNORA70F U70F small nucleolar RNA, H/ACA box 70F snoRNA 21-PTNLD28-NN-CD8CAR_peak_18275 chr3 178837966 178838118 + 9.20699 NA intron (NR_125401, intron 2 of 2) SVA_F|Other|Other 27719 NR_125401 101928739 Hs.434553 NR_125401 ENSG00000229102 LOC101928739 - uncharacterized LOC101928739 ncRNA 21-PTNLD28-NN-CD8CAR_peak_100 chr1 3500358 3500446 + 9.19248 NA intron (NM_001409, intron 3 of 36) CpG -23048 NR_030277 693135 NR_030277 MIR551A MIRN551A microRNA 551a ncRNA 21-PTNLD28-NN-CD8CAR_peak_13141 chr19 58953595 58953678 + 9.19248 NA Intergenic AluYb8|SINE|Alu -2047 NM_003433 7691 Hs.156169 NM_003433 HPRD:07240 ZNF132 pHZ-12 zinc finger protein 132 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14194 chr2 105868458 105868543 + 9.18286 NA Intergenic SVA_D|Other|Other 10300 NM_007227 11250 Hs.590903 NM_007227 HPRD:05325 GPR45 PSP24|PSP24(ALPHA)|PSP24A G protein-coupled receptor 45 protein-coding 21-PTNLD28-NN-CD8CAR_peak_24464 chr8 14280704 14280785 + 9.15467 NA intron (NM_139167, intron 2 of 7) L1PA3|LINE|L1 430275 NR_029875 494332 NR_029875 MIR383 MIRN383|hsa-mir-383 microRNA 383 ncRNA 21-PTNLD28-NN-CD8CAR_peak_8172 chr15 24596225 24596317 + 9.15467 NA Intergenic AluY|SINE|Alu -181218 NR_026647 791115 Hs.560378 NR_026647 ENSG00000260551 PWRN2 NCRNA00199 Prader-Willi region non-protein coding RNA 2 ncRNA 21-PTNLD28-NN-CD8CAR_peak_21079 chr5 170402481 170402561 + 9.15467 NA intron (NM_022897, intron 14 of 27) AluSx|SINE|Alu 113625 NM_022897 64901 Hs.410810 NM_022897 HPRD:05847 RANBP17 - RAN binding protein 17 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27337 chrX 51888499 51888579 + 9.15467 NA Intergenic L1PA4|LINE|L1 -39380 NM_001242362 81557 Hs.522650 NM_030801 HPRD:06631 MAGED4B - melanoma antigen family D, 4B protein-coding 21-PTNLD28-NN-CD8CAR_peak_25654 chr9 29997469 29997561 + 9.15467 NA Intergenic L1PA3|LINE|L1 410937 NR_046204 401497 Hs.680131 NR_046204 LINC01242 - long intergenic non-protein coding RNA 1242 ncRNA 21-PTNLD28-NN-CD8CAR_peak_16236 chr21 39945210 39945303 + 9.15467 NA intron (NR_111949, intron 3 of 4) LTR5A|LTR|ERVK 11613 NM_001243429 2078 Hs.473819 NM_004449 HPRD:01298 ERG erg-3|p55 v-ets avian erythroblastosis virus E26 oncogene homolog protein-coding 21-PTNLD28-NN-CD8CAR_peak_14324 chr2 117582190 117582270 + 9.15467 NA Intergenic L1PA4|LINE|L1 -990025 NM_006773 8886 Hs.744922 NM_006773 HPRD:05894 DDX18 MrDb DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18780 chr4 15205671 15205771 + 9.15467 NA Intergenic L1PA2|LINE|L1 -135839 NM_001135170 114905 Hs.153714 NM_031911 HPRD:16633 C1QTNF7 CTRP7|ZACRP7 C1q and tumor necrosis factor related protein 7 protein-coding 21-PTNLD28-NN-CD8CAR_peak_24379 chr8 5354828 5354928 + 9.15467 NA Intergenic L1PA3|LINE|L1 -502550 NM_033225 64478 Hs.571466 NM_033225 HPRD:10523 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_13078 chr19 57208462 57208562 + 9.15467 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -25389 NM_001005850 90485 Hs.458438 NM_001005850 HPRD:12521 ZNF835 BC37295_3 zinc finger protein 835 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27566 chrX 78072195 78072292 + 9.15467 NA Intergenic AluSq2|SINE|Alu 69037 NM_001278000 2846 Hs.522701 NM_005296 HPRD:02099 LPAR4 GPR23|LPA4|P2RY9|P2Y5-LIKE|P2Y9 lysophosphatidic acid receptor 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14284 chr2 113609193 113609273 + 9.15467 NA Intergenic AluSc|SINE|Alu -14877 NM_000576 3553 Hs.126256 NM_000576 HPRD:00985 IL1B IL-1|IL1-BETA|IL1F2 interleukin 1, beta protein-coding 21-PTNLD28-NN-CD8CAR_peak_14804 chr2 188222381 188222499 + 9.15467 NA intron (NM_005795, intron 12 of 14) L1PA3|LINE|L1 90581 NM_001271751 10203 Hs.470882 NM_005795 HPRD:11809 CALCRL CGRPR|CRLR calcitonin receptor-like protein-coding 21-PTNLD28-NN-CD8CAR_peak_28167 chrY 58912829 58912909 + 9.15467 NA Intergenic (CATTC)n|Satellite|Satellite -187588 NM_005840 10251 Hs.381912 NM_005840 HPRD:03917 SPRY3 HSPRY3|spry-3 sprouty homolog 3 (Drosophila) protein-coding 21-PTNLD28-NN-CD8CAR_peak_27627 chrX 102066400 102066480 + 9.15467 NA intron (NR_038988, intron 2 of 7) L1PA2|LINE|L1 42345 NR_038988 100287765 Hs.687084 NR_038988 ENSG00000223546 LINC00630 LL0XNC01-157D4.1|LL0XNC01-237H1.2 long intergenic non-protein coding RNA 630 ncRNA 21-PTNLD28-NN-CD8CAR_peak_6410 chr12 81788468 81788553 + 9.15467 NA intron (NM_001220474, intron 6 of 30) L1PA8|LINE|L1 -25317 NM_001220479 8499 Hs.506216 NM_003625 HPRD:04392 PPFIA2 - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14490 chr2 134767381 134767613 + 9.15467 NA Intergenic CpG -117199 NR_037450 100500878 NR_037450 miRBase:MI0016080 MIR3679 - microRNA 3679 ncRNA 21-PTNLD28-NN-CD8CAR_peak_14178 chr2 101823143 101823228 + 9.15467 NA Intergenic AluSp|SINE|Alu -46160 NM_017546 55571 Hs.744080 NM_017546 HPRD:12812 CNOT11 C2orf29 CCR4-NOT transcription complex, subunit 11 protein-coding 21-PTNLD28-NN-CD8CAR_peak_10011 chr17 475137 475250 + 9.15467 NA intron (NM_018289, intron 12 of 17) SVA_D|Other|Other 142903 NM_001128159 55275 Hs.461819 NM_018289 HPRD:07720 VPS53 HCCS1|PCH2E|hVps53L|pp13624 vacuolar protein sorting 53 homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_25657 chr9 32363948 32364028 + 9.15467 NA Intergenic AluSz|SINE|Alu -20613 NM_002197 48 Hs.567229 NM_002197 HPRD:00013 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1, soluble protein-coding 21-PTNLD28-NN-CD8CAR_peak_24991 chr8 89838841 89838923 + 9.15467 NA Intergenic L1PA3|LINE|L1 -499165 NM_005941 4325 Hs.492187 NM_005941 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 (membrane-inserted) protein-coding 21-PTNLD28-NN-CD8CAR_peak_17504 chr3 84139775 84139855 + 9.15467 NA Intergenic L1P1|LINE|L1 778911 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 21-PTNLD28-NN-CD8CAR_peak_16609 chr22 30799776 30799966 + 9.15467 NA intron (NM_012429, intron 2 of 11) AluYb8|SINE|Alu 6941 NM_012429 23541 Hs.335614 NM_012429 HPRD:06344 SEC14L2 C22orf6|SPF|TAP|TAP1 SEC14-like 2 (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_5358 chr11 109016512 109016607 + 9.15467 NA Intergenic SVA_B|Other|Other -276287 NM_207645 399947 Hs.172982 NM_207645 HPRD:14218 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16692 chr22 38585087 38585228 + 9.15467 NA Intergenic (GGGTG)n|Simple_repeat|Simple_repeat -7321 NM_001199562 8398 Hs.170479 NM_003560 HPRD:04675 PLA2G6 CaI-PLA2|GVI|INAD1|IPLA2-VIA|NBIA2|NBIA2A|NBIA2B|PARK14|PLA2|PNPLA9|iPLA2|iPLA2beta phospholipase A2, group VI (cytosolic, calcium-independent) protein-coding 21-PTNLD28-NN-CD8CAR_peak_18837 chr4 33311576 33311657 + 9.15467 NA Intergenic AluSp|SINE|Alu 2589579 NM_032457 5099 Hs.479439 NM_002589 HPRD:04288 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4246 chr11 191809 191898 + 9.15232 NA Intergenic (CCCTAA)n|Simple_repeat|Simple_repeat -1227 NM_001097610 653486 Hs.127059 NM_001097610 LOC653486 - secretoglobin, family 1C, member 1-like protein-coding 21-PTNLD28-NN-CD8CAR_peak_17109 chr3 26928304 26928388 + 9.15027 NA Intergenic L1PA3|LINE|L1 264046 NM_052953 116135 Hs.517868 NM_052953 HPRD:14318 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding 21-PTNLD28-NN-CD8CAR_peak_22192 chr6 77613522 77613626 + 9.15027 NA Intergenic L1PA3|LINE|L1 559546 NM_000863 3351 Hs.123016 NM_000863 HTR1B 5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled protein-coding 21-PTNLD28-NN-CD8CAR_peak_7090 chr13 55637767 55637884 + 9.14452 NA Intergenic AluYa5|SINE|Alu -110764 NR_049804 100846996 NR_049804 miRBase:MI0017874 MIR5007 - microRNA 5007 ncRNA 21-PTNLD28-NN-CD8CAR_peak_20934 chr5 149049160 149049248 + 9.14181 NA Intergenic SVA_D|Other|Other -60611 NM_001172698 133522 Hs.483816 NM_133263 HPRD:10594 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B peroxisome proliferator-activated receptor gamma, coactivator 1 beta protein-coding 21-PTNLD28-NN-CD8CAR_peak_17544 chr3 93511866 93511947 + 9.11632 NA Intergenic ALR/Alpha|Satellite|centr 181028 NM_000313 5627 Hs.64016 NM_000313 HPRD:01473 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S (alpha) protein-coding 21-PTNLD28-NN-CD8CAR_peak_23836 chr7 120892841 120892921 + 9.10258 NA intron (NM_024913, intron 18 of 22) L1PA4|LINE|L1 -72540 NM_016087 51384 Hs.272375 NM_016087 HPRD:05882 WNT16 - wingless-type MMTV integration site family, member 16 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3274 chr10 27712245 27712332 + 9.10258 NA Intergenic L1PA4|LINE|L1 -8991 NM_001034842 374308 Hs.631832 NM_001034842 ENSG00000182077 PTCHD3 PTR patched domain containing 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_13162 chr19_gl000208_random 21375 21464 + 9.08595 NA NA ALR/Alpha|Satellite|centr NA NA 21-PTNLD28-NN-CD8CAR_peak_28137 chrY 28805176 28805262 + 9.07230 NA Intergenic (GAATG)n|Satellite|Satellite 930582 NR_002176 474148 Hs.511777 NR_002176 TTTY3B LNCRNA00122|NCRNA00122 testis-specific transcript, Y-linked 3B (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_2396 chr1 191038341 191038488 + 9.06092 NA Intergenic L1PA2|LINE|L1 444394 NR_033922 440704 Hs.518802 NR_033922 ENSG00000231175 LOC440704 - uncharacterized LOC440704 ncRNA 21-PTNLD28-NN-CD8CAR_peak_19718 chr4 186160998 186161094 + 9.03983 NA intron (NM_031953, intron 1 of 18) SVA_D|Other|Other 29762 NM_031953 83891 Hs.369091 NM_031953 HPRD:15414 SNX25 SBBI31 sorting nexin 25 protein-coding 21-PTNLD28-NN-CD8CAR_peak_23984 chr7 136658109 136658209 + 9.02032 NA intron (NM_001006626, intron 3 of 4) HAL1-2a_MD|LINE|L1 70245 NR_030165 574443 NR_030165 miRBase:MI0003125 MIR490 MIRN490|hsa-mir-490|miR-490 microRNA 490 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9188 chr16 28351785 28351960 + 9.00923 NA Intergenic L2b|LINE|L2 22309 NM_001282524 728741 Hs.726467 NM_001282524 ENSG00000198156 NPIPB6 NPIPB nuclear pore complex interacting protein family, member B6 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19458 chr4 123733532 123733689 + 9.00329 NA Intergenic SVA_D|Other|Other -14253 NM_002006 2247 Hs.284244 NM_002006 HPRD:00622 FGF2 BFGF|FGF-2|FGFB|HBGF-2 fibroblast growth factor 2 (basic) protein-coding 21-PTNLD28-NN-CD8CAR_peak_9509 chr16 46482937 46483051 + 8.99373 NA Intergenic Intergenic 120015 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_26597 chr9 136453703 136453783 + 8.97913 NA Intergenic Intergenic -8375 NM_001080515 642968 Hs.741379 NM_001080515 FAM163B C9orf166 family with sequence similarity 163, member B protein-coding 21-PTNLD28-NN-CD8CAR_peak_23534 chr7 86155122 86155244 + 8.97913 NA Intergenic L1PA4|LINE|L1 -118047 NM_000840 2913 Hs.590575 NM_000840 HPRD:03070 GRM3 GLUR3|GPRC1C|MGLUR3|mGlu3 glutamate receptor, metabotropic 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26401 chr9 122632911 122632998 + 8.96739 NA Intergenic LTR12C|LTR|ERV1 374374 NR_029604 406939 NR_029604 miRBase:MI0000262 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA 21-PTNLD28-NN-CD8CAR_peak_27930 chrY 10042983 10043316 + 8.93964 NA Intergenic ALR/Alpha|Satellite|centr 294742 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_11366 chr18 25674582 25674669 + 8.93900 NA intron (NM_001792, intron 2 of 15) AluY|SINE|Alu 82820 NM_001792 1000 Hs.464829 NM_001792 HPRD:00226 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2, type 1, N-cadherin (neuronal) protein-coding 21-PTNLD28-NN-CD8CAR_peak_20094 chr5 46369494 46369622 + 8.93817 NA Intergenic ALR/Alpha|Satellite|centr -673338 NM_021072 348980 Hs.353176 NM_021072 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide-gated potassium channel 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6615 chr12 111304804 111304901 + 8.93124 NA intron (NM_001286243, intron 3 of 10) SVA_F|Other|Other 20088 NM_152591 160762 Hs.437141 NM_152591 HPRD:08765 CCDC63 ODA5 coiled-coil domain containing 63 protein-coding 21-PTNLD28-NN-CD8CAR_peak_22638 chr6 158261123 158261284 + 8.89846 NA intron (NM_016224, intron 1 of 17) intron (NM_016224, intron 1 of 17) 17000 NM_016224 51429 Hs.191213 NM_016224 HPRD:12072 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27497 chrX 69970344 69970438 + 8.89846 NA intron (NM_001003811, intron 10 of 30) L1PA2|LINE|L1 158176 NM_031276 56159 Hs.121776 NM_031276 HPRD:02256 TEX11 TGC1|TSGA3 testis expressed 11 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27633 chrX 103445607 103445714 + 8.85903 NA Intergenic AluSq2|SINE|Alu 34504 NM_207318 139231 Hs.496535 NM_207318 HPRD:10045 FAM199X CXorf39 family with sequence similarity 199, X-linked protein-coding 21-PTNLD28-NN-CD8CAR_peak_24447 chr8 12232066 12232160 + 8.85903 NA intron (NR_026789, intron 2 of 4) intron (NR_026789, intron 2 of 4) 5185 NR_046415 649352 Hs.742474 NR_046415 LOC649352 - ubiquitin carboxyl-terminal hydrolase 17-like protein 2-like pseudo 21-PTNLD28-NN-CD8CAR_peak_6999 chr13 41474377 41474599 + 8.82510 NA intron (NR_038259, intron 1 of 5) SVA_D|Other|Other 21398 NR_038259 100616668 Hs.660718 NR_038258 TPTE2P5 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 pseudo 21-PTNLD28-NN-CD8CAR_peak_15721 chr20 45417721 45417874 + 8.81934 NA Intergenic (TG)n|Simple_repeat|Simple_repeat 79518 NM_030777 81031 Hs.305971 NM_030777 HPRD:05851 SLC2A10 ATS|GLUT10 solute carrier family 2 (facilitated glucose transporter), member 10 protein-coding 21-PTNLD28-NN-CD8CAR_peak_5410 chr11 116218558 116218707 + 8.81934 NA Intergenic SVA_C|Other|Other 425082 NM_032725 84811 Hs.437341 NM_032725 HPRD:11307 BUD13 Cwc26|fSAP71 BUD13 homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_7893 chr14 78213533 78213722 + 8.81934 NA intron (NM_012245, intron 3 of 13) SVA_B|Other|Other -13546 NM_174943 283579 Hs.375834 NM_174943 HPRD:08080 C14orf178 - chromosome 14 open reading frame 178 protein-coding 21-PTNLD28-NN-CD8CAR_peak_24366 chr8 5009618 5009739 + 8.79624 NA Intergenic L1PA8|LINE|L1 -157350 NM_033225 64478 Hs.571466 NM_033225 HPRD:10523 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14534 chr2 143370689 143370845 + 8.79594 NA Intergenic L1PA2|LINE|L1 -264428 NM_003937 8942 Hs.470126 NM_003937 HPRD:08940 KYNU - kynureninase protein-coding 21-PTNLD28-NN-CD8CAR_peak_26273 chr9 102459527 102459627 + 8.79012 NA intron (NR_109802, intron 3 of 6) L1PA4|LINE|L1 122594 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA 21-PTNLD28-NN-CD8CAR_peak_17138 chr3 33713517 33713655 + 8.79012 NA intron (NM_015097, intron 6 of 38) L1PA3|LINE|L1 -12653 NM_001207044 23122 Hs.108614 NM_015097 HPRD:12054 CLASP2 - cytoplasmic linker associated protein 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_24353 chr8 1792545 1792628 + 8.77997 NA intron (NM_014629, intron 2 of 28) intron (NM_014629, intron 2 of 28) 20437 NM_014629 9639 Hs.98594 NM_014629 HPRD:09735 ARHGEF10 GEF10 Rho guanine nucleotide exchange factor (GEF) 10 protein-coding 21-PTNLD28-NN-CD8CAR_peak_7211 chr13 102046052 102046185 + 8.77997 NA intron (NM_052867, intron 3 of 43) AluSp|SINE|Alu 22695 NM_052867 259232 Hs.525146 NM_052867 HPRD:15647 NALCN CanIon|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding 21-PTNLD28-NN-CD8CAR_peak_4498 chr11 23028906 23029061 + 8.77997 NA Intergenic L1PA3|LINE|L1 -147011 NM_001195637 100500938 Hs.555029 NM_001195637 ENSG00000255359 CCDC179 - coiled-coil domain containing 179 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19073 chr4 58887579 58887667 + 8.77997 NA Intergenic L1HS|LINE|L1 -911072 NM_001253835 3490 Hs.479808 NM_001553 HPRD:04183 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin-like growth factor binding protein 7 protein-coding 21-PTNLD28-NN-CD8CAR_peak_10859 chr17 60437743 60437825 + 8.74030 NA Intergenic L1PA8|LINE|L1 -9795 NM_001144933 146779 Hs.152670 NM_173503 HPRD:08077 EFCAB3 - EF-hand calcium binding domain 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_1739 chr1 149198648 149198728 + 8.73310 NA Intergenic SVA_D|Other|Other -88442 NR_111933 388692 Hs.271249 NM_001013644 LOC388692 - uncharacterized LOC388692 ncRNA 21-PTNLD28-NN-CD8CAR_peak_19797 chr4_gl000193_random 104463 104570 + 8.72007 NA Intergenic SST1|Satellite|centr -16141 NR_038377 441058 Hs.130535 NR_038377 MGC39584 - uncharacterized LOC441058 ncRNA 21-PTNLD28-NN-CD8CAR_peak_27470 chrX 63758479 63758559 + 8.70164 NA Intergenic L1PA3|LINE|L1 -143186 NM_017677 55613 Hs.442892 NM_017677 HPRD:06664 MTMR8 - myotubularin related protein 8 protein-coding 21-PTNLD28-NN-CD8CAR_peak_15232 chr2 242863727 242864230 + 8.70164 NA intron (NR_110220, intron 2 of 3) intron (NR_110220, intron 2 of 3) 40464 NR_110220 101927289 Hs.130180 NR_110220 ENSG00000233806 LINC01237 - long intergenic non-protein coding RNA 1237 ncRNA 21-PTNLD28-NN-CD8CAR_peak_27569 chrX 78111118 78111237 + 8.68535 NA Intergenic L1PA3|LINE|L1 45569 NR_036258 100422932 NR_036258 MIR4328 - microRNA 4328 ncRNA 21-PTNLD28-NN-CD8CAR_peak_2886 chr1 235955844 235955925 + 8.68535 NA intron (NM_001301365, intron 11 of 52) AluSx1|SINE|Alu 60476 NR_031718 100302139 NR_031718 miRBase:MI0007258 MIR1537 MIRN1537|hsa-mir-1537 microRNA 1537 ncRNA 21-PTNLD28-NN-CD8CAR_peak_7102 chr13 68139035 68139119 + 8.66300 NA Intergenic L1PA3|LINE|L1 -334609 NM_203487 5101 Hs.654709 NM_020403 HPRD:04661 PCDH9 - protocadherin 9 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25069 chr8 101903777 101903859 + 8.65141 NA Intergenic SVA_D|Other|Other 58981 NM_001135702 7534 Hs.492407 NM_003406 HPRD:03183 YWHAZ 14-3-3-zeta|HEL-S-3|HEL4|KCIP-1|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta protein-coding 21-PTNLD28-NN-CD8CAR_peak_23314 chr7 64961121 64961277 + 8.63481 NA intron (NR_038378, intron 9 of 9) intron (NR_038378, intron 9 of 9) 122487 NM_007139 168374 Hs.9521 NM_007139 HPRD:04919 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding 21-PTNLD28-NN-CD8CAR_peak_15434 chr20 26310945 26311025 + 8.61910 NA Intergenic ALR/Alpha|Satellite|centr -121116 NR_040095 284801 Hs.370699 NR_040095 ENSG00000227195 MIR663AHG - MIR663A host gene (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_21189 chr5 178943919 178944248 + 8.61709 NA Intergenic Intergenic -33479 NM_025158 80230 Hs.306769 NM_025158 HPRD:15282 RUFY1 RABIP4|ZFYVE12 RUN and FYVE domain containing 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14987 chr2 209700526 209700733 + 8.60918 NA Intergenic L1PA4|LINE|L1 429074 NM_005048 5746 Hs.570296 NM_005048 HPRD:03276 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding 21-PTNLD28-NN-CD8CAR_peak_18980 chr4 49324234 49324462 + 8.59891 NA Intergenic Intergenic 335689 NM_001286791 80157 Hs.479703 NM_025087 HPRD:08638 CWH43 CWH43-C cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_22185 chr6 75305690 75305770 + 8.58634 NA intron (NR_110856, intron 2 of 3) L1PA2|LINE|L1 526563 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA 21-PTNLD28-NN-CD8CAR_peak_27495 chrX 69821253 69821341 + 8.58634 NA intron (NM_001003811, intron 25 of 30) L1P1|LINE|L1 -145453 NR_109801 100873930 Hs.571699 NR_046586 DLG3-AS1 - DLG3 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_3522 chr10 42632447 42632543 + 8.56314 NA Intergenic Intergenic 230998 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_842 chr1 46706796 46706940 + 8.55866 NA Intergenic SVA_F|Other|Other -6499 NM_001142548 8438 Hs.642042 NM_003579 HPRD:04683 RAD54L HR54|RAD54A|hHR54|hRAD54 RAD54-like (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_16012 chr21 10699456 10699558 + 8.55427 NA Intergenic ALR/Alpha|Satellite|centr 291436 NM_001290224 7179 Hs.122986 NM_199259 HPRD:05064 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding 21-PTNLD28-NN-CD8CAR_peak_11149 chr17 80533959 80534179 + 8.54856 NA intron (NM_004514, intron 4 of 8) CpG 56475 NM_004514 3607 Hs.591140 NM_004514 HPRD:00982 FOXK2 ILF|ILF-1|ILF1 forkhead box K2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25935 chr9 67087495 67087680 + 8.54297 NA Intergenic Intergenic -55515 NR_046175 286297 Hs.645503 NR_046175 ENSG00000182021 LOC286297 - uncharacterized LOC286297 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25969 chr9 69594707 69594898 + 8.54297 NA Intergenic Intergenic -56559 NR_024443 100133920 Hs.645503 NR_024443 LOC100133920 - uncharacterized LOC100133920 ncRNA 21-PTNLD28-NN-CD8CAR_peak_8264 chr15 37596016 37596096 + 8.51540 NA Intergenic L1PA3|LINE|L1 -202556 NM_002399 4212 Hs.510989 NM_002399 HPRD:03443 MEIS2 HsT18361|MRG1 Meis homeobox 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_22 chr1 725768 726013 + 8.51508 NA Intergenic (GAATG)n|Satellite|Satellite -11822 NR_033908 100288069 Hs.527521 NR_033908 ENSG00000228327 LOC100288069 - uncharacterized LOC100288069 ncRNA 21-PTNLD28-NN-CD8CAR_peak_4674 chr11 48539260 48539351 + 8.51132 NA Intergenic L1PA3|LINE|L1 28960 NM_001005512 403253 Hs.554532 NM_001005512 HPRD:17718 OR4A47 OR11-113 olfactory receptor, family 4, subfamily A, member 47 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25959 chr9 68733351 68733444 + 8.46546 NA intron (NR_034006, intron 3 of 5) L1MEc|LINE|L1 6856 NR_034006 100132352 Hs.231861 NR_034006 LOC100132352 - FSHD region gene 1 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_14301 chr2 114151966 114152357 + 8.43300 NA Intergenic SVA_F|Other|Other -43107 NM_172003 150472 Hs.531330 NM_172003 HPRD:16687 CBWD2 - COBW domain containing 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25879 chr9 66250061 66250246 + 8.43300 NA Intergenic Intergenic -207136 NR_121647 103352539 Hs.351215 NR_121647 LINC01410 - long intergenic non-protein coding RNA 1410 ncRNA 21-PTNLD28-NN-CD8CAR_peak_3402 chr10 39030638 39030746 + 8.42812 NA Intergenic Intergenic 40965 NR_045000 399746 Hs.742607 NR_045000 ENSG00000227264 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 21-PTNLD28-NN-CD8CAR_peak_4754 chr11 55024279 55024386 + 8.39760 NA Intergenic ALR/Alpha|Satellite|centr -5326 NM_024114 79097 Hs.195715 NM_024114 HPRD:15565 TRIM48 RNF101 tripartite motif containing 48 protein-coding 21-PTNLD28-NN-CD8CAR_peak_22818 chr7 2140992 2141176 + 8.37938 NA intron (NM_001013836, intron 11 of 18) intron (NM_001013836, intron 11 of 18) 131499 NM_003550 8379 Hs.654838 NM_003550 HPRD:04065 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 MAD1 mitotic arrest deficient-like 1 (yeast) protein-coding 21-PTNLD28-NN-CD8CAR_peak_22790 chr7 1029617 1029814 + 8.35220 NA TTS (NM_017781) TTS (NM_017781) 6880 NM_017781 54905 Hs.272795 NM_017781 HPRD:07901 CYP2W1 - cytochrome P450, family 2, subfamily W, polypeptide 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19623 chr4 160445203 160445399 + 8.32566 NA Intergenic SVA_F|Other|Other 256303 NM_014247 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_24393 chr8 7195504 7195613 + 8.31799 NA exon (NM_001256874, exon 1 of 1) exon (NM_001256874, exon 1 of 1) 921 NM_001256874 645402 Hs.741134 NM_001256874 USP17L4 - ubiquitin specific peptidase 17-like family member 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_8063 chr14 104363035 104363123 + 8.31799 NA Intergenic Intergenic 24824 NM_001127393 9556 Hs.109052 NM_004894 HPRD:05199 C14orf2 MP68|PLPM chromosome 14 open reading frame 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3835 chr10 79648764 79648887 + 8.29049 NA intron (NM_004747, intron 1 of 31) intron (NM_004747, intron 1 of 31) 37523 NM_004747 9231 Hs.652690 NM_004747 HPRD:04972 DLG5 LP-DLG|P-DLG5|PDLG discs, large homolog 5 (Drosophila) protein-coding 21-PTNLD28-NN-CD8CAR_peak_3539 chr10 42809983 42810104 + 8.29046 NA Intergenic (CATTC)n|Satellite|Satellite 53450 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_27884 chrY 287436 287593 + 8.28567 NA intron (NM_013239, intron 1 of 12).2 intron (NM_013239, intron 1 of 12).2 10176 NM_013239 28227 Hs.124942 NM_013239 HPRD:02276 PPP2R3B NYREN8|PPP2R3L|PPP2R3LY|PR48 protein phosphatase 2, regulatory subunit B'', beta protein-coding 21-PTNLD28-NN-CD8CAR_peak_27113 chrX 337436 337593 + 8.28567 NA intron (NM_013239, intron 1 of 12) intron (NM_013239, intron 1 of 12) 10176 NM_013239 28227 Hs.124942 NM_013239 HPRD:02276 PPP2R3B NYREN8|PPP2R3L|PPP2R3LY|PR48 protein phosphatase 2, regulatory subunit B'', beta protein-coding 21-PTNLD28-NN-CD8CAR_peak_26957 chrUn_gl000225 57209 57307 + 8.26035 NA NA BSR/Beta|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_22802 chr7 1483676 1483876 + 8.22253 NA intron (NM_182924, intron 6 of 16) CpG 15333 NM_182924 79778 Hs.376617 NM_024723 HPRD:11364 MICALL2 JRAB|MICAL-L2 MICAL-like 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_13227 chr2 1643806 1643936 + 8.22185 NA intron (NM_012293, intron 19 of 22) intron (NM_012293, intron 19 of 22) 104448 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin homolog (Drosophila) protein-coding 21-PTNLD28-NN-CD8CAR_peak_1050 chr1 71060865 71060949 + 8.22185 NA Intergenic L1PA3|LINE|L1 184006 NM_001902 1491 Hs.19904 NM_001902 HPRD:09633 CTH - cystathionine gamma-lyase protein-coding 21-PTNLD28-NN-CD8CAR_peak_12322 chr19 27750137 27750319 + 8.22114 NA Intergenic ALR/Alpha|Satellite|centr -534147 NR_110688 101927151 Hs.567934 NR_110687 LOC101927151 - uncharacterized LOC101927151 ncRNA 21-PTNLD28-NN-CD8CAR_peak_11544 chr18 60472149 60472297 + 8.21985 NA intron (NM_194449, intron 1 of 16) (CATATA)n|Simple_repeat|Simple_repeat 89551 NM_194449 23239 Hs.465337 NM_194449 HPRD:15145 PHLPP1 PHLPP|PLEKHE1|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_8975 chr16 5252543 5252686 + 8.21985 NA Intergenic SVA_E|Other|Other -104793 NM_001289029 196483 Hs.406461 NM_201400 HPRD:18018 FAM86A - family with sequence similarity 86, member A protein-coding 21-PTNLD28-NN-CD8CAR_peak_5859 chr12 22497767 22497874 + 8.21932 NA Intergenic L1PA4|LINE|L1 -10172 NM_003034 6489 Hs.408614 NM_003034 HPRD:03078 ST8SIA1 GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25153 chr8 114922136 114922237 + 8.21232 NA Intergenic L1PA2|LINE|L1 -472944 NM_198123 114788 Hs.91381 NM_052900 HPRD:16329 CSMD3 - CUB and Sushi multiple domains 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_9459 chr16 34173919 34174016 + 8.19042 NA Intergenic AluJb|SINE|Alu -211464 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA 21-PTNLD28-NN-CD8CAR_peak_4109 chr10 120942268 120942404 + 8.18838 NA Intergenic SVA_D|Other|Other -3959 NM_006793 10935 Hs.523302 NM_006793 HPRD:05305 PRDX3 AOP-1|AOP1|HBC189|MER5|PRO1748|SP-22|prx-III peroxiredoxin 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25929 chr9 66990353 66990466 + 8.18806 NA Intergenic ALR/Alpha|Satellite|centr 41663 NR_046175 286297 Hs.645503 NR_046175 ENSG00000182021 LOC286297 - uncharacterized LOC286297 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9417 chr16 33586484 33586615 + 8.17583 NA Intergenic Intergenic -23306 NR_046943 100873777 NR_046943 ENSG00000206787 RNU6-76P RNU6-76 RNA, U6 small nuclear 76, pseudogene snRNA 21-PTNLD28-NN-CD8CAR_peak_11705 chr19 1690091 1690171 + 8.15904 NA Intergenic AluY|SINE|Alu -37803 NM_003200 6929 Hs.371282 NM_003200 HPRD:00918 TCF3 E2A|E47|ITF1|TCF-3|VDIR|bHLHb21 transcription factor 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18196 chr3 162036800 162037031 + 8.14922 NA Intergenic (CATA)n|Simple_repeat|Simple_repeat 822319 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15 otolin 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25792 chr9 39731756 39731846 + 8.11473 NA Intergenic L1PA5|LINE|L1 -153141 NM_001085452 647060 Hs.575677 NM_001040065 ENSG00000204848 SPATA31A1 C9orf36|C9orf36A|FAM75A1|FAM75A2|SPATA31A2 SPATA31 subfamily A, member 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11245 chr18 9385479 9385559 + 8.11473 NA intron (NM_020648, intron 3 of 4) AluYb8|SINE|Alu 50754 NM_020648 57045 Hs.514685 NM_020648 HPRD:05443 TWSG1 TSG twisted gastrulation BMP signaling modulator 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6000 chr12 39360779 39360859 + 8.11473 NA Intergenic L1PA3|LINE|L1 -61399 NM_153634 144402 Hs.40910 NM_153634 HPRD:16747 CPNE8 - copine VIII protein-coding 21-PTNLD28-NN-CD8CAR_peak_14176 chr2 101625625 101625711 + 8.11473 NA intron (NM_001102426, intron 19 of 19) AluY|SINE|Alu 6977 NM_001098577 6160 Hs.469473 NM_000993 HPRD:17994 RPL31 L31 ribosomal protein L31 protein-coding 21-PTNLD28-NN-CD8CAR_peak_15378 chr20 21735998 21736157 + 8.11473 NA Intergenic Intergenic 49780 NM_006192 5075 Hs.122310 NM_006192 PAX1 HUP48|OFC2 paired box 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25785 chr9 39202451 39202541 + 8.11473 NA intron (NM_033655, intron 3 of 23) L1PA5|LINE|L1 85804 NM_033655 79937 Hs.128474 NM_033655 HPRD:10842 CNTNAP3 CASPR3|CNTNAP3A contactin associated protein-like 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6837 chr12 129674714 129674806 + 8.11473 NA intron (NM_133448, intron 5 of 8) intron (NM_133448, intron 5 of 8) -18386 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 LOC101927735 - uncharacterized LOC101927735 ncRNA 21-PTNLD28-NN-CD8CAR_peak_3194 chr10 17222292 17222377 + 8.11473 NA intron (NM_004412, intron 1 of 10) AluSq|SINE|Alu 21736 NM_004412 1787 Hs.351665 NM_004412 HPRD:16001 TRDMT1 DMNT2|DNMT2|MHSAIIP|PUMET|RNMT1 tRNA aspartic acid methyltransferase 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25034 chr8 97569307 97569387 + 8.11473 NA intron (NM_002998, intron 1 of 4) L1PA2|LINE|L1 63465 NM_002998 6383 Hs.1501 NM_002998 HPRD:00803 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_5338 chr11 106671238 106671319 + 8.11473 NA intron (NM_001256424, intron 5 of 8) L1PA5|LINE|L1 217893 NM_000855 2977 Hs.24321 NM_000855 HPRD:03146 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1, soluble, alpha 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_17621 chr3 108352583 108352676 + 8.11473 NA intron (NM_014648, intron 9 of 32) intron (NM_014648, intron 9 of 32) -44138 NM_020890 57650 Hs.591308 NM_020890 HPRD:11151 KIAA1524 CIP2A|p90 KIAA1524 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11650 chr18_gl000207_random 4007 4236 + 8.11473 NA NA (TGG)n|Simple_repeat|Simple_repeat NA NA 21-PTNLD28-NN-CD8CAR_peak_3057 chr10 5300114 5300194 + 8.11473 NA Intergenic L1PA5|LINE|L1 61356 NM_001818 1109 Hs.567245 NM_001818 HPRD:07040 AKR1C4 3-alpha-HSD|C11|CDR|CHDR|DD-4|DD4|HAKRA aldo-keto reductase family 1, member C4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_20574 chr5 109577294 109577374 + 8.11473 NA Intergenic L1PA3|LINE|L1 358451 NR_033175 100289673 Hs.368405 NR_033175 LOC100289673 - phosphoglycerate mutase family member 5 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_22150 chr6 70077863 70077975 + 8.11473 NA intron (NM_001704, intron 29 of 31) L1PA2|LINE|L1 429130 NM_018368 55788 Hs.271643 NM_018368 HPRD:12877 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_15253 chr20 1059540 1059622 + 8.11473 NA Intergenic AluSz|SINE|Alu -34325 NM_178578 9491 Hs.471917 NM_006814 HPRD:17919 PSMF1 PI31 proteasome (prosome, macropain) inhibitor subunit 1 (PI31) protein-coding 21-PTNLD28-NN-CD8CAR_peak_322 chr1 22699384 22699464 + 8.11473 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat -78920 NM_014870 9923 Hs.418966 NM_014870 HPRD:11086 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding 21-PTNLD28-NN-CD8CAR_peak_24368 chr8 5025564 5025645 + 8.11473 NA Intergenic AluSg4|SINE|Alu -173276 NM_033225 64478 Hs.571466 NM_033225 HPRD:10523 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16157 chr21 33596876 33596971 + 8.11473 NA Intergenic L1PA2|LINE|L1 54453 NM_018944 54069 Hs.190518 NM_018944 HPRD:10749 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding 21-PTNLD28-NN-CD8CAR_peak_17505 chr3 84784659 84784739 + 8.11473 NA intron (NR_033860, intron 11 of 20) L1PA3|LINE|L1 134027 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 21-PTNLD28-NN-CD8CAR_peak_5097 chr11 70669190 70669290 + 8.11473 NA intron (NM_012309, intron 8 of 22) CpG -39655 NR_073536 220070 Hs.326766 NM_145308 HPRD:14132 SHANK2-AS3 C11orf76 SHANK2 antisense RNA 3 ncRNA 21-PTNLD28-NN-CD8CAR_peak_19414 chr4 120300400 120300480 + 8.11473 NA Intergenic L1PA2|LINE|L1 31375 NR_037596 401149 Hs.448518 NR_037596 LINC01061 - long intergenic non-protein coding RNA 1061 ncRNA 21-PTNLD28-NN-CD8CAR_peak_6218 chr12 57216331 57216419 + 8.11473 NA Intergenic LTR5A|LTR|ERVK 59373 NM_003725 8630 Hs.524513 NM_003725 HPRD:09431 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid (17-beta) dehydrogenase 6 protein-coding 21-PTNLD28-NN-CD8CAR_peak_20144 chr5 51611934 51612014 + 8.10608 NA Intergenic L1PA4|LINE|L1 -471800 NM_015946 53918 Hs.644352 NM_015946 PELO PRO1770 pelota homolog (Drosophila) protein-coding 21-PTNLD28-NN-CD8CAR_peak_25523 chr8 146114224 146114304 + 8.06733 NA intron (NM_021061, intron 4 of 5) AluY|SINE|Alu 12582 NM_001109689 58500 Hs.532277 NM_021061 HPRD:15758 ZNF250 ZFP647|ZNF647 zinc finger protein 250 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6109 chr12 51963899 51963985 + 8.04135 NA Intergenic L1PA3|LINE|L1 -21078 NM_001177984 6334 Hs.436550 NM_014191 HPRD:09006 SCN8A CERIII|CIAT|EIEE13|MED|NaCh6|Nav1.6|PN4 sodium channel, voltage gated, type VIII, alpha subunit protein-coding 21-PTNLD28-NN-CD8CAR_peak_15148 chr2 234767487 234767567 + 8.04135 NA Intergenic AluSz|SINE|Alu -4315 NM_001282962 55355 Hs.532968 NM_018410 ENSG00000123485 HJURP FAKTS|URLC9|hFLEG1 Holliday junction recognition protein protein-coding 21-PTNLD28-NN-CD8CAR_peak_4169 chr10 128035243 128035342 + 8.02925 NA intron (NM_001288975, intron 1 of 18) L1PA5|LINE|L1 41835 NM_001288975 8038 Hs.594351 NM_003474 HPRD:04092 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding 21-PTNLD28-NN-CD8CAR_peak_13233 chr2 2299351 2299471 + 8.02861 NA intron (NM_015025, intron 1 of 24) (GA)n|Simple_repeat|Simple_repeat -23593 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_20228 chr5 62883115 62883197 + 8.01737 NA Intergenic L1PA3|LINE|L1 374963 NM_000524 3350 Hs.247940 NM_000524 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled protein-coding 21-PTNLD28-NN-CD8CAR_peak_1262 chr1 104137103 104137502 + 7.99580 NA Intergenic LTR25-int|LTR|ERV1 -22697 NM_000699 279 Hs.654437 NM_000699 HPRD:00094 AMY2A AMY2|AMY2B|PA amylase, alpha 2A (pancreatic) protein-coding 21-PTNLD28-NN-CD8CAR_peak_19846 chr5 1941296 1941386 + 7.99001 NA Intergenic AluYb8|SINE|Alu -42688 NR_107011 102465854 NR_107011 MIR548BA hsa-mir-548ba microRNA 548ba ncRNA 21-PTNLD28-NN-CD8CAR_peak_24412 chr8 7829800 7829895 + 7.99001 NA exon (NM_001256872, exon 1 of 1) exon (NM_001256872, exon 1 of 1) 928 NM_001256872 392188 Hs.741135 NM_001256872 USP17L8 USP17L10 ubiquitin specific peptidase 17-like family member 8 protein-coding 21-PTNLD28-NN-CD8CAR_peak_24445 chr8 12064632 12064800 + 7.98639 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -13092 NM_001083537 85002 Hs.675799 NM_001083537 HPRD:17515 FAM86B1 - family with sequence similarity 86, member B1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_7121 chr13 75116346 75116431 + 7.98335 NA Intergenic L1PA3|LINE|L1 -10592 NR_034025 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA 21-PTNLD28-NN-CD8CAR_peak_13363 chr2 20185140 20185271 + 7.98098 NA intron (NM_001006657, intron 2 of 27) intron (NM_001006657, intron 2 of 27) 4679 NM_001006657 57539 Hs.205427 NM_020779 HPRD:15667 WDR35 CED2|IFT121|IFTA1|SRTD7 WD repeat domain 35 protein-coding 21-PTNLD28-NN-CD8CAR_peak_24731 chr8 43827007 43827103 + 7.95017 NA Intergenic ALR/Alpha|Satellite|centr 679470 NM_001005365 340441 Hs.531579 NM_001002920 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family, member A protein-coding 21-PTNLD28-NN-CD8CAR_peak_20090 chr5 46339517 46339617 + 7.92264 NA Intergenic ALR/Alpha|Satellite|centr -643347 NM_021072 348980 Hs.353176 NM_021072 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide-gated potassium channel 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11140 chr17 80305559 80305682 + 7.92242 NA Intergenic Intergenic -11503 NM_207459 400629 Hs.231897 NM_207459 HPRD:16940 TEX19 - testis expressed 19 protein-coding 21-PTNLD28-NN-CD8CAR_peak_8483 chr15 65368010 65368142 + 7.92072 NA Intergenic LTR12C|LTR|ERV1 -1078 NM_001101362 390594 Hs.586890 NM_001101362 ENSG00000234438 KBTBD13 HCG1645727|NEM6 kelch repeat and BTB (POZ) domain containing 13 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11098 chr17 78889160 78889357 + 7.91691 NA intron (NM_020761, intron 21 of 33) MER52A|LTR|ERV1 -76383 NM_024591 79643 Hs.514560 NM_024591 HPRD:08564 CHMP6 VPS20 charged multivesicular body protein 6 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4614 chr11 43373458 43373563 + 7.91691 NA Intergenic L1PA2|LINE|L1 -6925 NM_018259 55761 Hs.191186 NM_018259 HPRD:15582 TTC17 - tetratricopeptide repeat domain 17 protein-coding 21-PTNLD28-NN-CD8CAR_peak_20565 chr5 108677518 108677622 + 7.89581 NA intron (NM_014819, intron 9 of 9) SVA_F|Other|Other 68105 NM_014819 9867 Hs.483036 NM_014819 HPRD:11436 PJA2 Neurodap1|RNF131 praja ring finger 2, E3 ubiquitin protein ligase protein-coding 21-PTNLD28-NN-CD8CAR_peak_5253 chr11 87951716 87951798 + 7.87728 NA Intergenic L1PA4|LINE|L1 -43122 NM_022337 23682 Hs.591975 NM_022337 HPRD:05889 RAB38 NY-MEL-1|rrGTPbp RAB38, member RAS oncogene family protein-coding 21-PTNLD28-NN-CD8CAR_peak_28103 chrY 23108058 23108140 + 7.87728 NA Intergenic L1PA2|LINE|L1 190145 NM_001039567 140032 Hs.367761 NM_001039567 HPRD:15960 RPS4Y2 RPS4Y2P ribosomal protein S4, Y-linked 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3262 chr10 27018907 27019104 + 7.86116 NA intron (NM_014317, intron 8 of 11) AluYk4|SINE|Alu 32410 NM_014317 23590 Hs.558468 NM_014317 HPRD:09591 PDSS1 COQ1|COQ10D2|DPS|SPS|TPRT|TPT|TPT 1|hDPS1 prenyl (decaprenyl) diphosphate synthase, subunit 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11944 chr19 11225250 11225331 + 7.83169 NA intron (NM_001195799, intron 9 of 16) AluY|SINE|Alu 1140 NR_106946 102465534 NR_106946 MIR6886 hsa-mir-6886 microRNA 6886 ncRNA 21-PTNLD28-NN-CD8CAR_peak_16908 chr3 5634170 5634250 + 7.80302 NA Intergenic L1PA5|LINE|L1 -342270 NR_039953 100616334 NR_039953 miRBase:MI0017437 MIR4790 - microRNA 4790 ncRNA 21-PTNLD28-NN-CD8CAR_peak_8334 chr15 43061768 43061853 + 7.80302 NA intron (NM_173500, intron 13 of 14) L1PA6|LINE|L1 -32393 NM_138477 146059 Hs.599232 NM_138477 HPRD:08470 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4444 chr11 14871460 14871540 + 7.78542 NA intron (NM_000922, intron 12 of 15) L1PA3|LINE|L1 42251 NM_024514 120227 Hs.371427 NM_024514 HPRD:10569 CYP2R1 - cytochrome P450, family 2, subfamily R, polypeptide 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_15582 chr20 35264629 35264762 + 7.75315 NA intron (NM_032214, intron 2 of 7) AluYb8|SINE|Alu 9924 NM_175077 84174 Hs.713578 NM_032214 HPRD:05955 SLA2 C20orf156|MARS|SLAP-2|SLAP2 Src-like-adaptor 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14085 chr2 92322763 92322843 + 7.74381 NA Intergenic ALR/Alpha|Satellite|centr 193644 NR_027714 440888 Hs.730239 NM_001032412 ENSG00000226481 ACTR3BP2 FKSG73 ACTR3B pseudogene 2 pseudo 21-PTNLD28-NN-CD8CAR_peak_7066 chr13 50754627 50754717 + 7.72433 NA intron (NR_109974, intron 2 of 6) L1PA2|LINE|L1 8518 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 4 pseudo 21-PTNLD28-NN-CD8CAR_peak_7366 chr14 21651464 21651796 + 7.69415 NA Intergenic (TA)n|Simple_repeat|Simple_repeat 22032 NR_038970 283624 Hs.525210 NR_038970 ENSG00000258441 LINC00641 - long intergenic non-protein coding RNA 641 ncRNA 21-PTNLD28-NN-CD8CAR_peak_14986 chr2 209640416 209640496 + 7.69415 NA Intergenic L1PA3|LINE|L1 368901 NM_005048 5746 Hs.570296 NM_005048 HPRD:03276 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding 21-PTNLD28-NN-CD8CAR_peak_19123 chr4 73265634 73265751 + 7.69415 NA intron (NM_014243, intron 4 of 21) (TG)n|Simple_repeat|Simple_repeat 168824 NM_014243 9508 Hs.590919 NM_014243 HPRD:06893 ADAMTS3 ADAMTS-4 ADAM metallopeptidase with thrombospondin type 1 motif, 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11703 chr19 1660845 1660925 + 7.68707 NA Intergenic AluY|SINE|Alu -8557 NM_003200 6929 Hs.371282 NM_003200 HPRD:00918 TCF3 E2A|E47|ITF1|TCF-3|VDIR|bHLHb21 transcription factor 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_9120 chr16 21848772 21848881 + 7.67719 NA Intergenic Intergenic -18331 NR_003370 730092 Hs.31290 NR_003370 RRN3P1 - RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_27943 chrY 13119507 13119587 + 7.67504 NA Intergenic ALR/Alpha|Satellite|centr 1413842 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_6375 chr12 72303850 72304057 + 7.65761 NA intron (NR_027449, intron 10 of 15) L1PA3|LINE|L1 -28673 NM_173353 121278 Hs.736576 NM_173353 HPRD:09594 TPH2 ADHD7|NTPH tryptophan hydroxylase 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6391 chr12 73793176 73793403 + 7.65709 NA Intergenic L1PA2|LINE|L1 240319 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LOC101928137 - uncharacterized LOC101928137 ncRNA 21-PTNLD28-NN-CD8CAR_peak_23199 chr7 57553143 57553408 + 7.64419 NA Intergenic (GAGTG)n|Simple_repeat|Simple_repeat 43392 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18053 chr3 145814734 145814817 + 7.62498 NA intron (NM_000935, intron 7 of 18) SVA_E|Other|Other 64507 NM_000935 5352 Hs.477866 NM_000935 HPRD:03519 PLOD2 LH2|TLH procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_5982 chr12 38037142 38037361 + 7.60694 NA Intergenic ALR/Alpha|Satellite|centr -673306 NM_001013620 144245 Hs.259305 NM_001013620 ALG10B ALG10|KCR1 ALG10B, alpha-1,2-glucosyltransferase protein-coding 21-PTNLD28-NN-CD8CAR_peak_6389 chr12 73792532 73792633 + 7.57365 NA Intergenic L1PA2|LINE|L1 239612 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LOC101928137 - uncharacterized LOC101928137 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25176 chr8 118791122 118791310 + 7.57290 NA Intergenic L1PA4|LINE|L1 258264 NM_080651 90390 Hs.492612 NM_080651 HPRD:11631 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6075 chr12 49830377 49830593 + 7.56197 NA intron (NM_001293285, intron 3 of 14) SVA_F|Other|Other 47528 NR_033267 100335030 Hs.687044 NR_033267 LOC100335030 - FGFR1 oncogene partner 2 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_15442 chr20 29582726 29582825 + 7.53979 NA Intergenic Intergenic -29104 NR_003579 284802 Hs.653099 NM_207350 HPRD:17570 FRG1B C20orf80|bA348I14.2 FSHD region gene 1 family, member B pseudo 21-PTNLD28-NN-CD8CAR_peak_3405 chr10 39077031 39077210 + 7.53081 NA Intergenic (CATTC)n|Satellite|Satellite 87393 NR_045000 399746 Hs.742607 NR_045000 ENSG00000227264 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 21-PTNLD28-NN-CD8CAR_peak_15007 chr2 215017402 215017577 + 7.51666 NA intron (NR_047659, intron 17 of 17) LTR13|LTR|ERVK -258972 NM_001080500 402117 Hs.534834 NM_001080500 VWC2L - von Willebrand factor C domain containing protein 2-like protein-coding 21-PTNLD28-NN-CD8CAR_peak_13021 chr19 55621700 55621838 + 7.51666 NA intron (NM_017607, intron 3 of 21) intron (NM_017607, intron 3 of 21) 7199 NM_017607 54776 Hs.631579 NM_017607 HPRD:11452 PPP1R12C LENG3|MBS85|p84|p85 protein phosphatase 1, regulatory subunit 12C protein-coding 21-PTNLD28-NN-CD8CAR_peak_23194 chr7 57548547 57548632 + 7.51073 NA Intergenic (GAATG)n|Satellite|Satellite 38706 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26882 chrUn_gl000217 141377 141474 + 7.49175 NA NA Intergenic NA NA 21-PTNLD28-NN-CD8CAR_peak_8374 chr15 46828977 46829093 + 7.48234 NA Intergenic L1PA4|LINE|L1 -647368 NM_001198999 80031 Hs.511265 NM_020858 HPRD:10221 SEMA6D - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D protein-coding 21-PTNLD28-NN-CD8CAR_peak_24982 chr8 88286602 88286738 + 7.46943 NA intron (NM_173538, intron 6 of 10) L1PA3|LINE|L1 407994 NM_173538 168975 Hs.246284 NM_173538 HPRD:08192 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6427 chr12 89107913 89108059 + 7.44795 NA Intergenic L1PA2|LINE|L1 -133736 NM_000899 4254 Hs.1048 NM_000899 KITLG FPH2|KL-1|Kitl|MGF|SCF|SF|SHEP7 KIT ligand protein-coding 21-PTNLD28-NN-CD8CAR_peak_16046 chr21 10833861 10833995 + 7.43915 NA Intergenic (GAATG)n|Satellite|Satellite 157015 NM_001290224 7179 Hs.122986 NM_199259 HPRD:05064 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding 21-PTNLD28-NN-CD8CAR_peak_546 chr1 35124079 35124166 + 7.43891 NA Intergenic AluSq2|SINE|Alu -96526 NM_005268 2709 Hs.198249 NM_005268 HPRD:06840 GJB5 CX31.1 gap junction protein, beta 5, 31.1kDa protein-coding 21-PTNLD28-NN-CD8CAR_peak_543 chr1 35032113 35032282 + 7.41673 NA Intergenic L1HS|LINE|L1 -188451 NM_005268 2709 Hs.198249 NM_005268 HPRD:06840 GJB5 CX31.1 gap junction protein, beta 5, 31.1kDa protein-coding 21-PTNLD28-NN-CD8CAR_peak_26985 chrUn_gl000225 95543 95631 + 7.39115 NA NA BSR/Beta|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_23217 chr7 57994807 57994895 + 7.37885 NA Intergenic ALR/Alpha|Satellite|centr 484968 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding 21-PTNLD28-NN-CD8CAR_peak_20200 chr5 58496171 58496427 + 7.34865 NA intron (NM_001104631, intron 2 of 14) (CATATA)n|Simple_repeat|Simple_repeat 75646 NM_001197220 5144 Hs.117545 NM_006203 HPRD:02530 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D, cAMP-specific protein-coding 21-PTNLD28-NN-CD8CAR_peak_26666 chr9 140273609 140273749 + 7.34865 NA intron (NR_104598, intron 4 of 10) CpG 44035 NM_001286823 54932 Hs.495553 NM_017820 HPRD:07906 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4750 chr11 55009124 55009345 + 7.33622 NA Intergenic ALR/Alpha|Satellite|centr -20424 NM_024114 79097 Hs.195715 NM_024114 HPRD:15565 TRIM48 RNF101 tripartite motif containing 48 protein-coding 21-PTNLD28-NN-CD8CAR_peak_15445 chr20 29618691 29618789 + 7.33106 NA intron (NR_003579, intron 2 of 7) L1MEc|LINE|L1 6861 NR_003579 284802 Hs.653099 NM_207350 HPRD:17570 FRG1B C20orf80|bA348I14.2 FSHD region gene 1 family, member B pseudo 21-PTNLD28-NN-CD8CAR_peak_26998 chrUn_gl000225 112357 112461 + 7.32760 NA NA BSR/Beta|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_20513 chr5 98761875 98761957 + 7.29931 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -107778 NR_110562 102724855 Hs.519477 NR_110562 CTD-2151A2.1 - uncharacterized LOC102724855 ncRNA 21-PTNLD28-NN-CD8CAR_peak_15045 chr2 219796153 219796241 + 7.28880 NA promoter-TSS (NR_110238) promoter-TSS (NR_110238) -838 NR_110238 101928537 Hs.611129 NR_110238 ENSG00000228135 LINC01494 - long intergenic non-protein coding RNA 1494 ncRNA 21-PTNLD28-NN-CD8CAR_peak_8768 chr15 101670968 101671133 + 7.28880 NA Intergenic L1MB3|LINE|L1 121087 NM_014918 22856 Hs.110488 NM_014918 HPRD:10493 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16344 chr21 47166337 47166523 + 7.27963 NA Intergenic CpG 89903 NR_038876 100129027 Hs.689591 NR_038876 ENSG00000205424 LOC100129027 - uncharacterized LOC100129027 ncRNA 21-PTNLD28-NN-CD8CAR_peak_14330 chr2 118383149 118383229 + 7.25939 NA Intergenic L1PA3|LINE|L1 -189066 NM_006773 8886 Hs.744922 NM_006773 HPRD:05894 DDX18 MrDb DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18932 chr4 49141424 49141507 + 7.25125 NA Intergenic (CATTC)n|Satellite|Satellite 152806 NM_001286791 80157 Hs.479703 NM_025087 HPRD:08638 CWH43 CWH43-C cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_14803 chr2 187817516 187817596 + 7.24602 NA Intergenic L1PA2|LINE|L1 -103659 NM_182521 151112 Hs.375054 NM_182521 HPRD:15902 ZSWIM2 MEX|ZZZ2 zinc finger, SWIM-type containing 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_5504 chr11 125934981 125935111 + 7.24602 NA Intergenic Intergenic -1859 NM_001243597 50937 Hs.38034 NM_016952 HPRD:16372 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding 21-PTNLD28-NN-CD8CAR_peak_17546 chr3 93514966 93515046 + 7.24313 NA Intergenic ALR/Alpha|Satellite|centr 177928 NM_000313 5627 Hs.64016 NM_000313 HPRD:01473 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S (alpha) protein-coding 21-PTNLD28-NN-CD8CAR_peak_28067 chrY 13830079 13830173 + 7.23600 NA Intergenic (GAATG)n|Satellite|Satellite 703263 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_11308 chr18 15174262 15174403 + 7.19752 NA Intergenic L1MB7|LINE|L1 151586 NR_027417 644669 Hs.579474 NR_027417 ENSG00000215512 LOC644669 - ankyrin repeat domain 30B pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_20016 chr5 37564013 37564098 + 7.18060 NA intron (NM_018034, intron 9 of 17) SVA_D|Other|Other 184643 NM_018034 55100 Hs.213690 NM_018034 WDR70 - WD repeat domain 70 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25687 chr9 33522414 33522510 + 7.18060 NA Intergenic L1MB4|LINE|L1 -1949 NM_001244752 441459 Hs.493710 NM_001013728 HPRD:18466 ANKRD18B bA255A11.3|bA255A11.5 ankyrin repeat domain 18B protein-coding 21-PTNLD28-NN-CD8CAR_peak_1598 chr1 145351339 145351505 + 7.17592 NA intron (NM_001039703, intron 58 of 85) intron (NM_001039703, intron 58 of 85) 58051 NM_001039703 100132406 Hs.714127 NM_001039703 ENSG00000163386 NBPF10 AB6|AG1|NBPF9 neuroblastoma breakpoint family, member 10 protein-coding 21-PTNLD28-NN-CD8CAR_peak_20683 chr5 128881506 128881596 + 7.17152 NA intron (NM_133638, intron 6 of 22) L1PA2|LINE|L1 -85169 NR_125748 103689846 Hs.628635 NR_125748 ADAMTS19-AS1 - ADAMTS19 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_19025 chr4 49659954 49660057 + 7.15008 NA Intergenic (GAATG)n|Satellite|Satellite 671346 NM_001286791 80157 Hs.479703 NM_025087 HPRD:08638 CWH43 CWH43-C cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_19072 chr4 58829574 58829658 + 7.11494 NA Intergenic L1PA4|LINE|L1 -853065 NM_001253835 3490 Hs.479808 NM_001553 HPRD:04183 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin-like growth factor binding protein 7 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27468 chrX 63518410 63518562 + 7.11494 NA intron (NM_017677, intron 12 of 13) L1PA2|LINE|L1 -67975 NM_130388 142689 Hs.56281 NM_130388 HPRD:06451 ASB12 - ankyrin repeat and SOCS box containing 12 protein-coding 21-PTNLD28-NN-CD8CAR_peak_9679 chr16 67324264 67324352 + 7.11379 NA TTS (NM_001129727) TTS (NM_001129727) 10816 NM_001129731 25894 Hs.188781 NM_015432 HPRD:10890 PLEKHG4 ARHGEF44|PRTPHN1|SCA4 pleckstrin homology domain containing, family G (with RhoGef domain) member 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_12973 chr19 53475658 53475738 + 7.10341 NA intron (NR_003578, intron 3 of 3) AluY|SINE|Alu -9534 NM_001202457 125893 Hs.655592 NM_001031665 HPRD:18722 ZNF816 ZNF816A zinc finger protein 816 protein-coding 21-PTNLD28-NN-CD8CAR_peak_15504 chr20 32124717 32124797 + 7.10341 NA intron (NM_001032999, intron 1 of 10) SVA_D|Other|Other -25414 NM_001039709 9139 Hs.153934 NM_005093 HPRD:04721 CBFA2T2 EHT|MTGR1|ZMYND3|p85 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11387 chr18 30828781 30828876 + 7.10341 NA intron (NM_001105528, intron 13 of 21) L1PA5|LINE|L1 191217 NM_001105528 374864 Hs.115461 NM_198995 HPRD:12691 CCDC178 C18orf34 coiled-coil domain containing 178 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4136 chr10 125014556 125014679 + 7.10341 NA Intergenic HAL1-2a_MD|LINE|L1 100857 NM_004725 9184 Hs.418533 NM_004725 HPRD:04761 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding 21-PTNLD28-NN-CD8CAR_peak_27480 chrX 65961365 65961445 + 7.10341 NA Intergenic L1PA4|LINE|L1 -102265 NM_001199687 60401 Hs.302017 NM_021783 HPRD:02230 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding 21-PTNLD28-NN-CD8CAR_peak_28149 chrY 58823256 58823336 + 7.10341 NA Intergenic (CATTC)n|Satellite|Satellite -277161 NM_005840 10251 Hs.381912 NM_005840 HPRD:03917 SPRY3 HSPRY3|spry-3 sprouty homolog 3 (Drosophila) protein-coding 21-PTNLD28-NN-CD8CAR_peak_5839 chr12 17601758 17601838 + 7.10341 NA Intergenic L1PA2|LINE|L1 -224435 NR_039770 100616279 NR_039770 MIR3974 - microRNA 3974 ncRNA 21-PTNLD28-NN-CD8CAR_peak_7088 chr13 55565184 55565390 + 7.10341 NA Intergenic AluYa5|SINE|Alu -183302 NR_049804 100846996 NR_049804 miRBase:MI0017874 MIR5007 - microRNA 5007 ncRNA 21-PTNLD28-NN-CD8CAR_peak_4990 chr11 65853685 65853793 + 7.10341 NA intron (NM_018026, intron 1 of 23) AluYf4|SINE|Alu 15915 NM_018026 55690 Hs.644326 NM_018026 HPRD:06320 PACS1 MRD17 phosphofurin acidic cluster sorting protein 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4492 chr11 20711532 20711612 + 7.10341 NA intron (NM_001288713, intron 3 of 20) L1PA3|LINE|L1 20475 NM_001288714 4745 Hs.657172 NM_006157 HPRD:09081 NELL1 IDH3GL|NRP1 NEL-like 1 (chicken) protein-coding 21-PTNLD28-NN-CD8CAR_peak_18767 chr4 13196290 13196370 + 7.10341 NA Intergenic L1PA4|LINE|L1 289659 NM_004249 9364 Hs.656060 NM_004249 HPRD:06699 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding 21-PTNLD28-NN-CD8CAR_peak_27201 chrX 21281707 21281807 + 7.10341 NA Intergenic L1PA3|LINE|L1 -110779 NM_001168649 22866 Hs.555917 NM_014927 HPRD:06473 CNKSR2 CNK2|KSR2|MAGUIN connector enhancer of kinase suppressor of Ras 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3651 chr10 56092758 56092838 + 7.10341 NA intron (NM_001142769, intron 7 of 35) AluSz|SINE|Alu 468253 NM_001142765 65217 Hs.280209 NM_033056 HPRD:05698 PCDH15 CDHR15|DFNB23|USH1F protocadherin-related 15 protein-coding 21-PTNLD28-NN-CD8CAR_peak_22193 chr6 77754189 77754331 + 7.10341 NA Intergenic L1PA2|LINE|L1 418860 NM_000863 3351 Hs.123016 NM_000863 HTR1B 5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled protein-coding 21-PTNLD28-NN-CD8CAR_peak_19391 chr4 115089692 115089772 + 7.10341 NA Intergenic L1PA3|LINE|L1 -188854 NM_024590 79642 Hs.22895 NM_024590 HPRD:08034 ARSJ - arylsulfatase family, member J protein-coding 21-PTNLD28-NN-CD8CAR_peak_10084 chr17 4758590 4758670 + 7.10341 NA intron (NM_001024937, intron 1 of 31) AluY|SINE|Alu 21995 NM_153827 50488 Hs.443417 NM_015716 HPRD:11366 MINK1 B55|MAP4K6|MINK|YSK2|ZC3|hMINK|hMINKbeta misshapen-like kinase 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3894 chr10 91771363 91771513 + 7.10341 NA Intergenic L1PA3|LINE|L1 -54308 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA 21-PTNLD28-NN-CD8CAR_peak_765 chr1 43662886 43662988 + 7.10341 NA intron (NM_152498, intron 6 of 10) AluY|SINE|Alu -24696 NM_001159936 10969 Hs.346868 NM_006824 HPRD:16849 EBNA1BP2 EBP2|NOBP|P40 EBNA1 binding protein 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_7017 chr13 43822135 43822215 + 7.10341 NA intron (NM_001127615, intron 14 of 16) AluYa5|SINE|Alu 134874 NR_047013 100874159 Hs.633241 NR_047013 LINC00400 - long intergenic non-protein coding RNA 400 ncRNA 21-PTNLD28-NN-CD8CAR_peak_1167 chr1 90844600 90844680 + 7.10341 NA Intergenic (TA)n|Simple_repeat|Simple_repeat 338154 NM_020063 343472 Hs.451956 NM_020063 BARHL2 - BarH-like homeobox 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_23019 chr7 30859649 30859742 + 7.10341 NA intron (NM_032222, intron 5 of 17) AluYa5|SINE|Alu 48662 NM_032222 84182 Hs.660192 NM_032222 HPRD:13387 FAM188B C7orf67 family with sequence similarity 188, member B protein-coding 21-PTNLD28-NN-CD8CAR_peak_9327 chr16 31243849 31243933 + 7.09667 NA Intergenic SVA_D|Other|Other -15496 NM_152901 260434 Hs.58314 NM_152901 PYDC1 ASC2|POP1|PYC1 PYD (pyrin domain) containing 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_1105 chr1 84151868 84151958 + 7.07644 NA intron (NR_119375, intron 2 of 2) L1PA4|LINE|L1 174316 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA 21-PTNLD28-NN-CD8CAR_peak_11153 chr17 80629358 80629438 + 7.06440 NA intron (NM_006822, intron 1 of 5) intron (NM_006822, intron 1 of 5) -22987 NM_019613 56270 Hs.132161 NM_019613 HPRD:15669 WDR45B WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding 21-PTNLD28-NN-CD8CAR_peak_18425 chr3 190669896 190669976 + 7.06170 NA Intergenic AluY|SINE|Alu 74217 NR_024343 100170222 Hs.717310 NR_024343 SNAR-I snaR-3 small ILF3/NF90-associated RNA I snRNA 21-PTNLD28-NN-CD8CAR_peak_24441 chr8 11995279 11995359 + 7.06170 NA exon (NM_201402, exon 1 of 1) exon (NM_201402, exon 1 of 1) 950 NM_201402 377630 Hs.531448 NM_201402 HPRD:16844 USP17L2 DUB-3|DUB3|USP17 ubiquitin specific peptidase 17-like family member 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25737 chr9 35804843 35804980 + 7.06007 NA intron (NM_003995, intron 12 of 21) intron (NM_003995, intron 12 of 21) 7348 NM_172312 26206 Hs.256747 NM_012436 HPRD:12039 SPAG8 BS-84|CILD28|CT142|HSD-1|SMP1|SPAG3|hSMP-1 sperm associated antigen 8 protein-coding 21-PTNLD28-NN-CD8CAR_peak_12613 chr19 41686290 41686579 + 7.02944 NA Intergenic SVA_F|Other|Other -12681 NM_030622 29785 Hs.98370 NM_030622 HPRD:07481 CYP2S1 - cytochrome P450, family 2, subfamily S, polypeptide 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_17587 chr3 101472133 101472277 + 7.02858 NA intron (NM_024548, intron 6 of 10) L1PA3|LINE|L1 -25824 NM_145037 91775 Hs.595933 NM_145037 HPRD:10073 NXPE3 FAM55C|MST115 neurexophilin and PC-esterase domain family, member 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6599 chr12 110610564 110610644 + 7.02858 NA intron (NM_001143779, intron 11 of 18) SVA_D|Other|Other 48464 NM_031473 28981 Hs.528382 NM_014055 HPRD:09266 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1 intraflagellar transport 81 protein-coding 21-PTNLD28-NN-CD8CAR_peak_20027 chr5 39270749 39270853 + 7.02653 NA promoter-TSS (NM_001243093) promoter-TSS (NM_001243093) -42 NM_001243093 2533 Hs.370503 NM_001465 HPRD:04107 FYB ADAP|PRO0823|SLAP-130 FYN binding protein protein-coding 21-PTNLD28-NN-CD8CAR_peak_16857 chr22 50836242 50836417 + 7.02653 NA intron (NM_001242900, intron 3 of 22) intron (NM_001242900, intron 3 of 22) 54583 NM_001242900 9701 Hs.449098 NM_014678 HPRD:11102 PPP6R2 KIAA0685|PP6R2|SAP190|SAPS2 protein phosphatase 6, regulatory subunit 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_9195 chr16 28465606 28465737 + 7.00429 NA Intergenic L2b|LINE|L2 -27896 NM_001199142 8663 Hs.567374 NM_003752 HPRD:04889 EIF3C EIF3CL|EIF3S8|eIF3-p110 eukaryotic translation initiation factor 3, subunit C protein-coding 21-PTNLD28-NN-CD8CAR_peak_22714 chr6 167816154 167816249 + 6.99709 NA Intergenic Intergenic -18203 NM_004610 6953 Hs.351 NM_004610 TCP10 TCP10A t-complex 10 protein-coding 21-PTNLD28-NN-CD8CAR_peak_13510 chr2 33094524 33094797 + 6.99709 NA intron (NR_027098, intron 2 of 5) SVA_F|Other|Other -13106 NR_027099 285045 Hs.434660 NR_027098 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA 21-PTNLD28-NN-CD8CAR_peak_14686 chr2 170184612 170184847 + 6.99553 NA intron (NM_004525, intron 1 of 78) SVA_F|Other|Other 34393 NM_004525 4036 Hs.657729 NM_004525 HPRD:02509 LRP2 DBS|GP330 low density lipoprotein receptor-related protein 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_9425 chr16 33865818 33865943 + 6.97372 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat 96623 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA 21-PTNLD28-NN-CD8CAR_peak_13690 chr2 58491636 58491718 + 6.95585 NA Intergenic L1PA3|LINE|L1 -23162 NM_018062 55120 Hs.631890 NM_018062 HPRD:06997 FANCL FAAP43|PHF9|POG Fanconi anemia, complementation group L protein-coding 21-PTNLD28-NN-CD8CAR_peak_3440 chr10 39143293 39143431 + 6.93970 NA Intergenic (GAATG)n|Satellite|Satellite 153635 NR_045000 399746 Hs.742607 NR_045000 ENSG00000227264 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 21-PTNLD28-NN-CD8CAR_peak_18647 chr4 3511348 3511438 + 6.92625 NA non-coding (NR_110005, exon 8 of 8) non-coding (NR_110005, exon 8 of 8) 22483 NR_110005 4043 Hs.40966 NM_002337 LRPAP1 A2MRAP|A2RAP|HBP44|MRAP|MYP23|RAP|alpha-2-MRAP low density lipoprotein receptor-related protein associated protein 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11368 chr18 26731029 26731128 + 6.92105 NA Intergenic L1PA2|LINE|L1 -973633 NM_001792 1000 Hs.464829 NM_001792 HPRD:00226 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2, type 1, N-cadherin (neuronal) protein-coding 21-PTNLD28-NN-CD8CAR_peak_11470 chr18 46606793 46606952 + 6.92105 NA intron (NM_017653, intron 16 of 16) SVA_D|Other|Other -30734 NR_039898 100616420 NR_039898 MIR4744 - microRNA 4744 ncRNA 21-PTNLD28-NN-CD8CAR_peak_3392 chr10 38870923 38871009 + 6.89928 NA Intergenic (GAATG)n|Satellite|Satellite -118761 NR_045000 399746 Hs.742607 NR_045000 ENSG00000227264 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 21-PTNLD28-NN-CD8CAR_peak_16825 chr22 46766980 46767128 + 6.89903 NA intron (NM_014246, intron 25 of 34) intron (NM_014246, intron 25 of 34) 35756 NM_001282783 55687 Hs.439524 NM_018006 HPRD:15571 TRMU MTO2|MTU1|TRMT|TRMT1|TRNT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding 21-PTNLD28-NN-CD8CAR_peak_14616 chr2 159210222 159210305 + 6.89903 NA intron (NM_138803, intron 2 of 13) L1PA2|LINE|L1 103002 NM_138803 130940 Hs.668597 NM_138803 HPRD:14046 CCDC148 - coiled-coil domain containing 148 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27471 chrX 63759683 63759788 + 6.87474 NA Intergenic L1PA3|LINE|L1 -144402 NM_017677 55613 Hs.442892 NM_017677 HPRD:06664 MTMR8 - myotubularin related protein 8 protein-coding 21-PTNLD28-NN-CD8CAR_peak_8019 chr14 100647683 100647768 + 6.87474 NA Intergenic SVA_D|Other|Other -21713 NM_206918 123099 Hs.159643 NM_206918 DEGS2 C14orf66|DES2|FADS8 delta(4)-desaturase, sphingolipid 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_7304 chr13 115017500 115017700 + 6.87474 NA intron (NM_001078645, intron 12 of 17) intron (NM_001078645, intron 12 of 17) 17238 NM_001078645 8881 Hs.374127 NM_003903 HPRD:04587 CDC16 ANAPC6|APC6|CUT9 cell division cycle 16 protein-coding 21-PTNLD28-NN-CD8CAR_peak_7476 chr14 31932866 31932946 + 6.85198 NA Intergenic AluSz|SINE|Alu -6226 NM_080664 112487 Hs.116014 NM_080664 HPRD:16599 DTD2 C14orf126 D-tyrosyl-tRNA deacylase 2 (putative) protein-coding 21-PTNLD28-NN-CD8CAR_peak_4253 chr11 398515 398681 + 6.84758 NA intron (NM_007183, intron 4 of 12) intron (NM_007183, intron 4 of 12) 4381 NM_007183 11187 Hs.534395 NM_007183 HPRD:05711 PKP3 - plakophilin 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_23256 chr7 61762657 61762737 + 6.84712 NA Intergenic L1MEf|LINE|L1 1001737 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_3100 chr10 7568520 7568867 + 6.84526 NA Intergenic Intergenic 92943 NM_032817 80760 Hs.498586 NM_030569 HPRD:07865 ITIH5 ITI-HC5 inter-alpha-trypsin inhibitor heavy chain family, member 5 protein-coding 21-PTNLD28-NN-CD8CAR_peak_17541 chr3 93505788 93505903 + 6.81798 NA Intergenic ALR/Alpha|Satellite|centr 187089 NM_000313 5627 Hs.64016 NM_000313 HPRD:01473 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S (alpha) protein-coding 21-PTNLD28-NN-CD8CAR_peak_12070 chr19 14921272 14921352 + 6.78434 NA Intergenic AluY|SINE|Alu -10364 NM_198944 26664 Hs.466053 NM_198944 HPRD:17783 OR7C1 CIT-HSP-146E8|HSTPCR86P|OR19-5|OR7C4|TPCR86 olfactory receptor, family 7, subfamily C, member 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_22794 chr7 1078731 1078814 + 6.76587 NA intron (NM_001134395, intron 2 of 4) SVA_F|Other|Other -16110 NR_029898 442907 NR_029898 MIR339 MIRN339|hsa-mir-339 microRNA 339 ncRNA 21-PTNLD28-NN-CD8CAR_peak_26355 chr9 114403476 114403723 + 6.76430 NA intron (NM_004125, intron 1 of 2) SVA_F|Other|Other 9967 NM_004125 552891 Hs.534196 NM_004125 HPRD:10374 DNAJC25-GNG10 - DNAJC25-GNG10 readthrough protein-coding 21-PTNLD28-NN-CD8CAR_peak_1545 chr1 144186438 144186607 + 6.76430 NA intron (NM_001278267, intron 20 of 130) intron (NM_001278267, intron 20 of 130) 39711 NM_001278267 100288142 Hs.445080 NM_001278267 ENSG00000203832 NBPF20 - neuroblastoma breakpoint family, member 20 protein-coding 21-PTNLD28-NN-CD8CAR_peak_351 chr1 24321171 24321274 + 6.75469 NA Intergenic SVA_F|Other|Other -14269 NM_006625 10772 Hs.3530 NM_006625 HPRD:05562 SRSF10 FUSIP1|FUSIP2|NSSR|PPP1R149|SFRS13|SFRS13A|SRp38|SRrp40|TASR|TASR1|TASR2 serine/arginine-rich splicing factor 10 protein-coding 21-PTNLD28-NN-CD8CAR_peak_17513 chr3 87952107 87952205 + 6.75053 NA Intergenic L1PA3|LINE|L1 -79570 NM_000866 3355 Hs.248136 NM_000866 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine (serotonin) receptor 1F, G protein-coupled protein-coding 21-PTNLD28-NN-CD8CAR_peak_7271 chr13 113592456 113592543 + 6.72557 NA Intergenic MER101|LTR|ERV1 30453 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_20793 chr5 137746356 137746479 + 6.72557 NA intron (NM_016604, intron 11 of 23) LTR13|LTR|ERVK -28273 NR_073449 51308 Hs.416090 NM_016606 HPRD:16655 REEP2 C5orf19|SGC32445|SPG72 receptor accessory protein 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27783 chrX 147408661 147408801 + 6.71700 NA Intergenic L1PA4|LINE|L1 -173408 NM_001169124 2334 Hs.496911 NM_002025 HPRD:02397 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family, member 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_1057 chr1 73294614 73294694 + 6.69580 NA Intergenic L1PA4|LINE|L1 -477199 NR_110677 101927295 Hs.436589 NR_110676 ENSG00000233973 LINC01360 - long intergenic non-protein coding RNA 1360 ncRNA 21-PTNLD28-NN-CD8CAR_peak_2472 chr1 202174436 202174577 + 6.69539 NA intron (NM_021636, intron 1 of 17) (CA)n|Simple_repeat|Simple_repeat 1601 NM_021636 59352 Hs.497402 NM_021636 HPRD:05974 LGR6 GPCR|VTS20631 leucine-rich repeat containing G protein-coupled receptor 6 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27087 chrUn_gl000237 45478 45698 + 6.68422 NA NA (TAGA)n|Simple_repeat|Simple_repeat NA NA 21-PTNLD28-NN-CD8CAR_peak_480 chr1 31124544 31124752 + 6.66683 NA Intergenic (CCTG)n|Simple_repeat|Simple_repeat -66971 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9202 chr16 28671960 28672075 + 6.65962 NA Intergenic L2b|LINE|L2 -27862 NM_001199142 8663 Hs.567374 NM_003752 HPRD:04889 EIF3C EIF3CL|EIF3S8|eIF3-p110 eukaryotic translation initiation factor 3, subunit C protein-coding 21-PTNLD28-NN-CD8CAR_peak_27400 chrX 58545155 58545240 + 6.65550 NA Intergenic ALR/Alpha|Satellite|centr -608130 NM_007156 7789 Hs.550094 NM_007156 HPRD:02210 ZXDA ZNF896 zinc finger, X-linked, duplicated A protein-coding 21-PTNLD28-NN-CD8CAR_peak_14785 chr2 183079212 183079292 + 6.65167 NA intron (NM_001003683, intron 8 of 14) L1PA3|LINE|L1 27538 NM_001258314 5136 Hs.191046 NM_005019 HPRD:01387 PDE1A CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A, calmodulin-dependent protein-coding 21-PTNLD28-NN-CD8CAR_peak_2975 chr1 247859095 247859285 + 6.65167 NA Intergenic L1PA3|LINE|L1 16867 NM_001005286 343169 Hs.591529 NM_001005286 HPRD:17777 OR6F1 OR1-34|OR1-38|OST731 olfactory receptor, family 6, subfamily F, member 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_23162 chr7 55287444 55287524 + 6.65167 NA Intergenic SVA_F|Other|Other -30842 NR_047551 100507500 Hs.720489 NR_047551 ENSG00000224057 EGFR-AS1 - EGFR antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_6845 chr12 131612422 131612546 + 6.63785 NA intron (NM_198827, intron 20 of 24) (GGGTG)n|Simple_repeat|Simple_repeat -37072 NR_026670 116437 Hs.675497 NR_026670 ENSG00000204603 LINC01257 - long intergenic non-protein coding RNA 1257 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9444 chr16 33901653 33901752 + 6.61977 NA Intergenic AluSz6|SINE|Alu 60801 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA 21-PTNLD28-NN-CD8CAR_peak_27474 chrX 63878345 63878513 + 6.61852 NA Intergenic L1PA3|LINE|L1 -263096 NM_017677 55613 Hs.442892 NM_017677 HPRD:06664 MTMR8 - myotubularin related protein 8 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3533 chr10 42790788 42790882 + 6.61223 NA Intergenic (CATTC)n|Satellite|Satellite 72658 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_2782 chr1 228747831 228747929 + 6.60701 NA Intergenic CpG -32514 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 21-PTNLD28-NN-CD8CAR_peak_11294 chr18 14251681 14251822 + 6.58749 NA Intergenic Intergenic 72655 NR_040113 440482 Hs.632352 NM_001029999 ANKRD20A5P ANKRD20A5 ankyrin repeat domain 20 family, member A5, pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_19796 chr4_gl000193_random 91846 91926 + 6.58245 NA Intergenic SST1|Satellite|centr -3511 NR_038377 441058 Hs.130535 NR_038377 MGC39584 - uncharacterized LOC441058 ncRNA 21-PTNLD28-NN-CD8CAR_peak_22235 chr6 85338419 85338525 + 6.55605 NA Intergenic L1PA2|LINE|L1 135482 NM_001080508 9096 Hs.251830 NM_001080508 ENSG00000112837 TBX18 - T-box 18 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14322 chr2 116134170 116134250 + 6.52331 NA intron (NM_001004360, intron 3 of 25) L1PA3|LINE|L1 214526 NM_001004360 57628 Hs.580539 NM_020868 HPRD:07083 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl-peptidase 10 (non-functional) protein-coding 21-PTNLD28-NN-CD8CAR_peak_17467 chr3 71225895 71226035 + 6.52182 NA intron (NM_001244810, intron 6 of 20) AluSx1|SINE|Alu -45873 NM_001244815 27086 Hs.59368 NM_032682 HPRD:18518 FOXP1 12CC4|QRF1|hFKH1B forkhead box P1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11651 chr19 60525 60614 + 6.51978 NA TTS (NR_033266) TTS (NR_033266) 10397 NR_033266 375690 Hs.521961 NR_033266 WASH5P - WAS protein family homolog 5 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_13654 chr2 51962942 51963037 + 6.49023 NA Intergenic L1PA3|LINE|L1 -703315 NM_001135659 9378 Hs.637685 NM_004801 HPRD:11858 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27230 chrX 30620269 30620405 + 6.43918 NA Intergenic SVA_F|Other|Other -24304 NM_025159 80231 Hs.665009 NM_025159 HPRD:06518 CXorf21 - chromosome X open reading frame 21 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6860 chr12 132811902 132811982 + 6.43854 NA intron (NM_001122636, intron 6 of 10) intron (NM_001122636, intron 6 of 10) -40035 NR_024563 100130238 Hs.536338 NR_024563 LOC100130238 - uncharacterized LOC100130238 ncRNA 21-PTNLD28-NN-CD8CAR_peak_6822 chr12 125689068 125689339 + 6.41146 NA Intergenic MIRb|SINE|MIR -121959 NM_052907 114795 Hs.524838 NM_052907 TMEM132B - transmembrane protein 132B protein-coding 21-PTNLD28-NN-CD8CAR_peak_2594 chr1 209302205 209302300 + 6.39552 NA Intergenic SVA_D|Other|Other -299916 NM_001104548 642587 Hs.510543 NM_001104548 MIR205HG LINC00510 MIR205 host gene (non-protein coding) protein-coding 21-PTNLD28-NN-CD8CAR_peak_22453 chr6 126559605 126559685 + 6.39552 NA Intergenic L1PA4|LINE|L1 -101290 NM_001012507 387103 Hs.486401 NM_001012507 HPRD:16660 CENPW C6orf173|CENP-W|CUG2 centromere protein W protein-coding 21-PTNLD28-NN-CD8CAR_peak_26815 chrUn_gl000216 2602 2715 + 6.38317 NA NA (CATTC)n|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_24800 chr8 52447458 52447685 + 6.36398 NA intron (NM_144651, intron 4 of 22) SVA_E|Other|Other 274434 NM_144651 137902 Hs.444882 NM_144651 HPRD:08693 PXDNL PMR1|PRM1|VPO2 peroxidasin homolog (Drosophila)-like protein-coding 21-PTNLD28-NN-CD8CAR_peak_17826 chr3 127349036 127349169 + 6.33309 NA intron (NM_015720, intron 1 of 7) intron (NM_015720, intron 1 of 7) 1100 NM_015720 50512 Hs.591290 NM_015720 HPRD:15154 PODXL2 EG|PODLX2 podocalyxin-like 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_8823 chr16 868744 868899 + 6.33309 NA Intergenic (ATGGTG)n|Simple_repeat|Simple_repeat 13378 NM_001013638 388199 Hs.528461 NM_001013638 HPRD:18379 PRR25 gs64 proline rich 25 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4283 chr11 994750 994877 + 6.33309 NA intron (NM_012305, intron 14 of 21) intron (NM_012305, intron 14 of 21) 41893 NM_005961 4588 Hs.528432 NM_005961 ENSG00000184956 MUC6 MUC-6 mucin 6, oligomeric mucus/gel-forming protein-coding 21-PTNLD28-NN-CD8CAR_peak_4527 chr11 28255904 28256001 + 6.32915 NA intron (NM_001297775, intron 4 of 6) L1PA3|LINE|L1 126154 NM_001297775 196074 Hs.243326 NM_152636 HPRD:08750 METTL15 METT5D1 methyltransferase like 15 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16362 chr21 47722636 47722836 + 6.32915 NA intron (NM_001286477, intron 6 of 7) CpG 15398 NM_001286463 54058 Hs.236572 NM_058180 HPRD:10755 C21orf58 - chromosome 21 open reading frame 58 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3409 chr10 39081986 39082139 + 6.31741 NA Intergenic (CATTC)n|Satellite|Satellite 92335 NR_045000 399746 Hs.742607 NR_045000 ENSG00000227264 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 21-PTNLD28-NN-CD8CAR_peak_10416 chr17 29307520 29307698 + 6.30631 NA intron (NM_197939, intron 1 of 3) SVA_E|Other|Other 5256 NR_002221 503645 Hs.683578 NR_002221 DPRXP4 - divergent-paired related homeobox pseudogene 4 pseudo 21-PTNLD28-NN-CD8CAR_peak_22296 chr6 94343584 94343678 + 6.30287 NA Intergenic L1PA2|LINE|L1 -73170 NR_015362 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25065 chr8 101844786 101844874 + 6.30228 NA Intergenic HAL1|LINE|L1 -110515 NM_002568 26986 Hs.387804 NM_002568 HPRD:05247 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein, cytoplasmic 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16837 chr22 49036700 49036935 + 6.29079 NA intron (NM_015381, intron 1 of 3) intron (NM_015381, intron 1 of 3) 64699 NM_015381 25817 Hs.436854 NM_015381 HPRD:13295 FAM19A5 QLLK5208|TAFA-5|TAFA5|UNQ5208 family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 protein-coding 21-PTNLD28-NN-CD8CAR_peak_15978 chr21 9452598 9452693 + 6.28630 NA Intergenic Intergenic -373187 NR_037421 100500862 NR_037421 MIR3648-1 MIR3648 microRNA 3648-1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_26940 chrUn_gl000225 25036 25188 + 6.28454 NA NA BSR/Beta|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_9415 chr16 33524607 33525067 + 6.27699 NA intron (NR_046943, intron 1 of 2) intron (NR_046943, intron 1 of 2) 38406 NR_046943 100873777 NR_046943 ENSG00000206787 RNU6-76P RNU6-76 RNA, U6 small nuclear 76, pseudogene snRNA 21-PTNLD28-NN-CD8CAR_peak_16053 chr21 10851405 10851508 + 6.27432 NA Intergenic (GAATG)n|Satellite|Satellite 139487 NM_001290224 7179 Hs.122986 NM_199259 HPRD:05064 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding 21-PTNLD28-NN-CD8CAR_peak_7201 chr13 101964222 101964304 + 6.27290 NA intron (NM_052867, intron 7 of 43) L1PA4|LINE|L1 104550 NM_052867 259232 Hs.525146 NM_052867 HPRD:15647 NALCN CanIon|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding 21-PTNLD28-NN-CD8CAR_peak_27506 chrX 71252160 71252240 + 6.27207 NA intron (NM_001013627, intron 1 of 7) AluSx1|SINE|Alu -12059 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo 21-PTNLD28-NN-CD8CAR_peak_14946 chr2 204827947 204828033 + 6.22953 NA Intergenic HERVH-int|LTR|ERV1 26519 NM_012092 29851 Hs.56247 NM_012092 HPRD:09196 ICOS AILIM|CD278|CVID1 inducible T-cell co-stimulator protein-coding 21-PTNLD28-NN-CD8CAR_peak_1861 chr1 152882845 152882932 + 6.22070 NA exon (NM_005547, exon 2 of 2) exon (NM_005547, exon 2 of 2) 1849 NM_005547 3713 Hs.516439 NM_005547 HPRD:00931 IVL - involucrin protein-coding 21-PTNLD28-NN-CD8CAR_peak_5850 chr12 21363559 21363639 + 6.21157 NA intron (NM_006446, intron 11 of 14) L1PA2|LINE|L1 79471 NM_006446 10599 Hs.449738 NM_006446 HPRD:09214 SLCO1B1 HBLRR|LST-1|LST1|OATP-C|OATP1B1|OATP2|OATPC|SLC21A6 solute carrier organic anion transporter family, member 1B1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16039 chr21 10811875 10811977 + 6.21101 NA Intergenic (GAATG)n|Satellite|Satellite 179017 NM_001290224 7179 Hs.122986 NM_199259 HPRD:05064 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding 21-PTNLD28-NN-CD8CAR_peak_24243 chr7 154932291 154932456 + 6.19434 NA Intergenic (CCCCAG)n|Simple_repeat|Simple_repeat -69106 NR_038945 100128264 Hs.248137 NR_038945 ENSG00000220575 HTR5AOS HTR5A-AS1 HTR5A opposite strand ncRNA 21-PTNLD28-NN-CD8CAR_peak_9998 chr17 48186 48276 + 6.18182 NA Intergenic Intergenic -11189 NR_104420 100506371 NR_104420 LOC100506371 - uncharacterized LOC100506371 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9997 chr16 90294108 90294236 + 6.16772 NA Intergenic L1MC3|LINE|L1 -151834 NM_001098173 11105 Hs.406695 NM_052996 HPRD:17903 PRDM7 PFM4|ZNF910 PR domain containing 7 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25815 chr9 42587240 42587420 + 6.13886 NA Intergenic Intergenic 93813 NR_121572 100132541 Hs.646257 NR_121572 GXYLT1P3 - glucoside xylosyltransferase 1 pseudogene 3 pseudo 21-PTNLD28-NN-CD8CAR_peak_28111 chrY 27526483 27526563 + 6.12444 NA Intergenic Intergenic -74935 NR_001555 84559 Hs.531603 NR_001555 ENSG00000172332 GOLGA2P2Y GOLGA2LY|GOLGA2LY1|GOLGA2P2 golgin A2 pseudogene 2, Y-linked pseudo 21-PTNLD28-NN-CD8CAR_peak_27237 chrX 33099418 33099503 + 6.12444 NA intron (NM_000109, intron 1 of 78) AluSz|SINE|Alu 47084 NM_004010 1756 Hs.495912 NM_000109 HPRD:02303 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding 21-PTNLD28-NN-CD8CAR_peak_19535 chr4 145745280 145745401 + 6.12444 NA Intergenic L1PA3|LINE|L1 -178169 NR_037595 646576 Hs.632595 NR_037595 ENSG00000248890 HHIP-AS1 - HHIP antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_27779 chrX 144275148 144275228 + 6.12444 NA Intergenic AluY|SINE|Alu -53919 NM_001009614 494118 Hs.551270 NM_001009614 SPANXN1 CT11.6 SPANX family, member N1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_17567 chr3 98859411 98859498 + 6.12444 NA Intergenic L1P1|LINE|L1 -238921 NM_080927 131566 Hs.203691 NM_080927 HPRD:10567 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_291 chr1 19327485 19327662 + 6.12444 NA Intergenic AluY|SINE|Alu -44747 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_7283 chr13 114067288 114067412 + 6.12444 NA Intergenic CpG 36107 NM_199162 113622 Hs.98669 NM_138430 HPRD:12431 ADPRHL1 ARH2 ADP-ribosylhydrolase like 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6384 chr12 73712206 73712351 + 6.12444 NA Intergenic AluY|SINE|Alu 159308 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LOC101928137 - uncharacterized LOC101928137 ncRNA 21-PTNLD28-NN-CD8CAR_peak_7014 chr13 42818843 42818923 + 6.12444 NA intron (NR_123715, intron 30 of 31) AluYa5|SINE|Alu -27406 NM_016248 11215 Hs.105105 NM_016248 HPRD:05261 AKAP11 AKAP-11|AKAP220|PPP1R44|PRKA11 A kinase (PRKA) anchor protein 11 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25028 chr8 96565088 96565168 + 6.12444 NA intron (NR_038207, intron 2 of 2) L1PA2|LINE|L1 -283666 NM_177965 157657 Hs.548157 NM_177965 HPRD:14104 C8orf37 CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6675 chr12 118635596 118635676 + 6.12444 NA intron (NM_016281, intron 13 of 20) AluY|SINE|Alu 61766 NM_002567 5037 Hs.433863 NM_002567 HPRD:06850 PEBP1 HCNP|HCNPpp|HEL-210|HEL-S-34|PBP|PEBP|PEBP-1|RKIP phosphatidylethanolamine binding protein 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16535 chr22 23820151 23820335 + 6.12444 NA intron (NR_110539, intron 4 of 11) intron (NR_110539, intron 4 of 11) 8924 NR_110539 388882 Hs.542766 NR_110539 HPRD:14207 LOC388882 - uncharacterized LOC388882 ncRNA 21-PTNLD28-NN-CD8CAR_peak_28102 chrY 19028350 19028470 + 6.12444 NA Intergenic L1PA2|LINE|L1 -584428 NR_028083 340618 Hs.434364 NR_028083 FAM41AY1 FAM41AY family with sequence similarity 41, member A, Y-linked 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_13182 chr1_gl000191_random 63380 63494 + 6.12444 NA Intergenic SVA_F|Other|Other -13156 NM_054016 10772 Hs.3530 NM_006625 HPRD:05562 SRSF10 FUSIP1|FUSIP2|NSSR|PPP1R149|SFRS13|SFRS13A|SRp38|SRrp40|TASR|TASR1|TASR2 serine/arginine-rich splicing factor 10 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3197 chr10 17235062 17235194 + 6.12444 NA intron (NM_004412, intron 1 of 10) AluSx|SINE|Alu 8942 NM_004412 1787 Hs.351665 NM_004412 HPRD:16001 TRDMT1 DMNT2|DNMT2|MHSAIIP|PUMET|RNMT1 tRNA aspartic acid methyltransferase 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_24344 chr8 728650 728737 + 6.12444 NA intron (NR_073397, intron 1 of 3) L1PA2|LINE|L1 41088 NR_073397 619343 Hs.667939 NR_073397 ERICH1-AS1 C8orf68 ERICH1 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_27768 chrX 137759983 137760085 + 6.12444 NA intron (NM_033642, intron 3 of 4) L1PA3|LINE|L1 -10080 NR_030229 574507 NR_030229 MIR504 MIRN504|hsa-mir-504 microRNA 504 ncRNA 21-PTNLD28-NN-CD8CAR_peak_2154 chr1 166480368 166480450 + 6.12444 NA Intergenic AluY|SINE|Alu -92744 NR_002925 116123 Hs.348539 NM_138784 HPRD:14011 FMO9P - flavin containing monooxygenase 9 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_5555 chr11 133307535 133307615 + 6.12444 NA intron (NM_001012393, intron 1 of 7) C-rich|Low_complexity|Low_complexity 94828 NM_001012393 4978 Hs.4817 NM_002545 HPRD:07198 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule-like protein-coding 21-PTNLD28-NN-CD8CAR_peak_7083 chr13 54011544 54011637 + 6.12444 NA Intergenic L1PA2|LINE|L1 -285555 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA 21-PTNLD28-NN-CD8CAR_peak_4501 chr11 23442148 23442228 + 6.12444 NA Intergenic L1PA5|LINE|L1 -1452 NR_107021 102465860 NR_107021 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA 21-PTNLD28-NN-CD8CAR_peak_13497 chr2 31681115 31681197 + 6.12444 NA Intergenic LTR28|LTR|ERV1 -43545 NM_000379 7498 Hs.250 NM_000379 HPRD:06363 XDH XO|XOR xanthine dehydrogenase protein-coding 21-PTNLD28-NN-CD8CAR_peak_26431 chr9 125278647 125278728 + 6.12444 NA Intergenic AluYa5|SINE|Alu -2733 NM_001004452 26219 Hs.632679 NM_001004452 HPRD:14918 OR1J4 HSHTPCRX01|HTPCRX01|OR9-21 olfactory receptor, family 1, subfamily J, member 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_22284 chr6 90876418 90876498 + 6.12444 NA intron (NM_021813, intron 4 of 8) L1PA4|LINE|L1 130169 NM_021813 60468 Hs.269764 NM_021813 HPRD:12012 BACH2 BTBD25 BTB and CNC homology 1, basic leucine zipper transcription factor 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_28110 chrY 26435878 26435958 + 6.12346 NA Intergenic Intergenic -74940 NR_001555 84559 Hs.531603 NR_001555 ENSG00000172332 GOLGA2P2Y GOLGA2LY|GOLGA2LY1|GOLGA2P2 golgin A2 pseudogene 2, Y-linked pseudo 21-PTNLD28-NN-CD8CAR_peak_9058 chr16 16489703 16489816 + 6.11197 NA Intergenic L2b|LINE|L2 16657 NM_001282511 101059953 Hs.636569 NM_001282511 NPIPA8 LCR16a9 nuclear pore complex interacting protein family, member A8 protein-coding 21-PTNLD28-NN-CD8CAR_peak_20448 chr5 87911529 87911692 + 6.10479 NA intron (NR_015436, intron 3 of 4) SVA_D|Other|Other 51147 NR_030741 407047 NR_030741 miRBase:MI0000467 MIR9-2 MIRN9-2|hsa-mir-9-2|miRNA9-2 microRNA 9-2 ncRNA 21-PTNLD28-NN-CD8CAR_peak_3084 chr10 6452424 6452505 + 6.09024 NA Intergenic Intergenic 83957 NR_040079 399715 NR_040079 ENSG00000215244 LOC399715 - uncharacterized LOC399715 ncRNA 21-PTNLD28-NN-CD8CAR_peak_19662 chr4 171277760 171277840 + 6.04791 NA Intergenic L1PA2|LINE|L1 -266262 NM_001286683 51166 Hs.529735 NM_016228 HPRD:12392 AADAT KAT2|KATII aminoadipate aminotransferase protein-coding 21-PTNLD28-NN-CD8CAR_peak_13945 chr2 87656316 87656396 + 6.02147 NA Intergenic (CAGC)n|Simple_repeat|Simple_repeat -98618 NR_024204 112597 Hs.652166 NM_052871 HPRD:14654 LINC00152 C2orf59|NCRNA00152 long intergenic non-protein coding RNA 152 ncRNA 21-PTNLD28-NN-CD8CAR_peak_7286 chr13 114238257 114238462 + 5.99942 NA promoter-TSS (NM_007111) promoter-TSS (NM_007111) -644 NR_026580 7027 Hs.79353 NM_007111 HPRD:01792 TFDP1 DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3263 chr10 27020751 27020841 + 5.99942 NA intron (NM_014317, intron 8 of 11) AluSx|SINE|Alu 34201 NM_014317 23590 Hs.558468 NM_014317 HPRD:09591 PDSS1 COQ1|COQ10D2|DPS|SPS|TPRT|TPT|TPT 1|hDPS1 prenyl (decaprenyl) diphosphate synthase, subunit 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_7897 chr14 78250018 78250129 + 5.99259 NA Intergenic AluY|SINE|Alu -16353 NM_001142545 57143 Hs.413208 NM_020421 HPRD:10630 ADCK1 - aarF domain containing kinase 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_23225 chr7 58029425 58029571 + 5.98953 NA Intergenic ALR/Alpha|Satellite|centr 519615 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18949 chr4 49157934 49158029 + 5.98347 NA Intergenic (CATTC)n|Satellite|Satellite 169322 NM_001286791 80157 Hs.479703 NM_025087 HPRD:08638 CWH43 CWH43-C cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_1491 chr1 142587891 142587977 + 5.97459 NA Intergenic LTR16A|LTR|ERVL 125671 NR_046228 100874392 Hs.648245 NR_046228 ANKRD20A12P - ankyrin repeat domain 20 family, member A12, pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_843 chr1 46707384 46707552 + 5.96940 NA Intergenic SVA_F|Other|Other -5899 NM_001142548 8438 Hs.642042 NM_003579 HPRD:04683 RAD54L HR54|RAD54A|hHR54|hRAD54 RAD54-like (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_20475 chr5 92484736 92484816 + 5.96263 NA Intergenic L1PA3|LINE|L1 422273 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9367 chr16 32661261 32661508 + 5.96263 NA Intergenic Intergenic 26064 NM_001205259 653550 Hs.592038 NM_001205259 ENSG00000205457 TP53TG3C TP53TG3 TP53 target 3C protein-coding 21-PTNLD28-NN-CD8CAR_peak_16118 chr21 27228070 27228150 + 5.96115 NA Intergenic SSU-rRNA_Hsa|rRNA|rRNA -120145 NM_001685 522 Hs.246310 NM_001685 HPRD:04399 ATP5J ATP5|ATP5A|ATPM|CF6|F6 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 protein-coding 21-PTNLD28-NN-CD8CAR_peak_10003 chr17 164415 164495 + 5.95917 NA intron (NM_001190411, intron 4 of 8) intron (NM_001190411, intron 4 of 8) -16541 NM_001242780 100506388 Hs.627744 NM_001242780 LOC100506388 - uncharacterized LOC100506388 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18801 chr4 19010137 19010273 + 5.92874 NA Intergenic L1PA3|LINE|L1 -986722 NM_153686 254251 Hs.446201 NM_153686 HPRD:10088 LCORL MLR1 ligand dependent nuclear receptor corepressor-like protein-coding 21-PTNLD28-NN-CD8CAR_peak_18066 chr3 148283692 148283856 + 5.92208 NA Intergenic HERVK-int|LTR|ERVK -131884 NM_009585 185 Hs.477887 NM_000685 HPRD:00107 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor, type 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_9352 chr16 32159120 32159204 + 5.90951 NA Intergenic MER54A|LTR|ERVL 40272 NR_109773 100289574 Hs.531536 NR_109773 ENSG00000230267 HERC2P4 D16F37S5 hect domain and RLD 2 pseudogene 4 pseudo 21-PTNLD28-NN-CD8CAR_peak_24904 chr8 72848292 72848375 + 5.90662 NA intron (NR_033651, intron 1 of 2) L1PA3|LINE|L1 -37795 NR_046948 100873782 NR_046948 ENSG00000207298 RNU6-83P RNU6-83 RNA, U6 small nuclear 83, pseudogene snRNA 21-PTNLD28-NN-CD8CAR_peak_26467 chr9 128542049 128542314 + 5.89985 NA intron (NR_024123, intron 2 of 6) SVA_D|Other|Other 31703 NM_001134778 5090 Hs.428027 NM_006195 HPRD:15938 PBX3 - pre-B-cell leukemia homeobox 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_17594 chr3 102945118 102945235 + 5.89753 NA Intergenic L1PA2|LINE|L1 791317 NM_175056 131368 Hs.352213 NM_175056 HPRD:14048 ZPLD1 - zona pellucida-like domain containing 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_5894 chr12 27473723 27473847 + 5.89753 NA intron (NM_015000, intron 12 of 13) AluYc|SINE|Alu -12002 NM_001248005 56938 Hs.445447 NM_020183 ARNTL2 BMAL2|CLIF|MOP9|PASD9|bHLHe6 aryl hydrocarbon receptor nuclear translocator-like 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_9141 chr16 22549723 22549817 + 5.89680 NA Intergenic L2c|LINE|L2 -7249 NR_003676 653786 Hs.564945 NR_003676 ENSG00000257838 LOC653786 - otoancorin pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_1520 chr1 143345886 143346032 + 5.89475 NA Intergenic SATR1|Satellite|Satellite -143720 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA 21-PTNLD28-NN-CD8CAR_peak_18730 chr4 9237531 9237647 + 5.88620 NA exon (NM_001256894, exon 1 of 2) exon (NM_001256894, exon 1 of 2) 1478 NM_001256894 100288520 Hs.528621 NM_001256894 USP17L15 - ubiquitin specific peptidase 17-like family member 15 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18996 chr4 49521990 49522117 + 5.88439 NA Intergenic TAR1|Satellite|telo 533394 NM_001286791 80157 Hs.479703 NM_025087 HPRD:08638 CWH43 CWH43-C cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_27786 chrX 148420764 148420844 + 5.87909 NA Intergenic L1PA3|LINE|L1 166080 NM_000202 3423 Hs.460960 NM_000202 HPRD:02402 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding 21-PTNLD28-NN-CD8CAR_peak_6428 chr12 89241371 89241512 + 5.87909 NA Intergenic L1PA3|LINE|L1 172028 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LOC728084 - uncharacterized LOC728084 ncRNA 21-PTNLD28-NN-CD8CAR_peak_19643 chr4 168358806 168358886 + 5.86565 NA Intergenic HERVH-int|LTR|ERV1 -203105 NM_001204355 50859 Hs.481133 NM_016950 HPRD:12147 SPOCK3 HSAJ1454|TES-3|TICN3 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3900 chr10 93267035 93267121 + 5.85121 NA intron (NR_104291, intron 20 of 20) L1PA2|LINE|L1 97036 NM_182765 143279 Hs.596096 NM_173497 HPRD:13643 HECTD2 - HECT domain containing E3 ubiquitin protein ligase 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_2040 chr1 159539024 159539110 + 5.83445 NA Intergenic L1PA3|LINE|L1 -18549 NM_001639 325 Hs.507080 NM_001639 HPRD:00101 APCS HEL-S-92n|PTX2|SAP amyloid P component, serum protein-coding 21-PTNLD28-NN-CD8CAR_peak_18296 chr3 182144516 182144596 + 5.83445 NA Intergenic L1PA2|LINE|L1 59594 NR_040105 401103 Hs.591304 NR_040105 ENSG00000241098 FLJ46066 - uncharacterized LOC401103 ncRNA 21-PTNLD28-NN-CD8CAR_peak_2659 chr1 222260719 222260799 + 5.83445 NA Intergenic Intergenic -345241 NM_007207 11221 Hs.497822 NM_007207 HPRD:12320 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19419 chr4 121666956 121667036 + 5.82685 NA intron (NM_001300824, intron 12 of 13) L1PA3|LINE|L1 177025 NM_018699 11107 Hs.666782 NM_018699 HPRD:17902 PRDM5 BCS2|PFM2 PR domain containing 5 protein-coding 21-PTNLD28-NN-CD8CAR_peak_20368 chr5 75467472 75467777 + 5.82685 NA intron (NM_001297716, intron 2 of 12) SVA_F|Other|Other 88385 NM_001297716 22987 Hs.663229 NM_014979 HPRD:18753 SV2C - synaptic vesicle glycoprotein 2C protein-coding 21-PTNLD28-NN-CD8CAR_peak_27773 chrX 140361372 140361452 + 5.80364 NA Intergenic L1PA3|LINE|L1 -90013 NM_012317 23641 Hs.45231 NM_012317 HPRD:02322 LDOC1 BCUR1|Mar7|Mart7 leucine zipper, down-regulated in cancer 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19941 chr5 17587497 17587578 + 5.78266 NA Intergenic Intergenic -200118 NR_033975 401177 Hs.508311 NR_033975 ENSG00000250822 LOC401177 - uncharacterized LOC401177 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9378 chr16 32839003 32839113 + 5.78149 NA Intergenic Intergenic 57405 NR_003083 386757 Hs.433146 NM_198857 HPRD:13479 SLC6A10P CT-2|CT2|SLC6A10|SLC6A10pA solute carrier family 6 (neurotransmitter transporter), member 10, pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_9419 chr16 33830127 33830208 + 5.77868 NA Intergenic Intergenic 132336 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24734 chr8 43834927 43835014 + 5.74909 NA Intergenic ALR/Alpha|Satellite|centr 687385 NM_001005365 340441 Hs.531579 NM_001002920 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family, member A protein-coding 21-PTNLD28-NN-CD8CAR_peak_26807 chrUn_gl000214 136176 136524 + 5.73125 NA NA ACRO1|Satellite|acro NA NA 21-PTNLD28-NN-CD8CAR_peak_9435 chr16 33875959 33876128 + 5.72859 NA Intergenic (GAATG)n|Satellite|Satellite 86460 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA 21-PTNLD28-NN-CD8CAR_peak_22124 chr6 61919651 61919731 + 5.70754 NA Intergenic ALR/Alpha|Satellite|centr -364317 NM_001190706 100463487 NM_001190706 ENSG00000255633 MTRNR2L9 HN9 MT-RNR2-like 9 (pseudogene) protein-coding 21-PTNLD28-NN-CD8CAR_peak_24372 chr8 5049899 5049979 + 5.70687 NA Intergenic L1PA3|LINE|L1 -197611 NM_033225 64478 Hs.571466 NM_033225 HPRD:10523 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_17096 chr3 25742995 25743114 + 5.70298 NA Intergenic L1HS|LINE|L1 -36624 NR_039644 100616477 NR_039644 miRBase:MI0016785 MIR4442 - microRNA 4442 ncRNA 21-PTNLD28-NN-CD8CAR_peak_5261 chr11 90796241 90796542 + 5.68339 NA Intergenic SVA_D|Other|Other -507366 NR_039711 100616186 NR_039711 miRBase:MI0016852 MIR4490 - microRNA 4490 ncRNA 21-PTNLD28-NN-CD8CAR_peak_17630 chr3 110740281 110740361 + 5.68339 NA Intergenic L1PA2|LINE|L1 48485 NR_045114 100506555 Hs.535689 NR_045114 PVRL3-AS1 - PVRL3 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_7291 chr13 114454996 114455099 + 5.66454 NA promoter-TSS (NR_028064) promoter-TSS (NR_028064) -985 NR_028064 100130386 Hs.704121 NM_001137672 LINC00552 - long intergenic non-protein coding RNA 552 ncRNA 21-PTNLD28-NN-CD8CAR_peak_14944 chr2 204789404 204789485 + 5.65293 NA Intergenic AluSz|SINE|Alu -12027 NM_012092 29851 Hs.56247 NM_012092 HPRD:09196 ICOS AILIM|CD278|CVID1 inducible T-cell co-stimulator protein-coding 21-PTNLD28-NN-CD8CAR_peak_22736 chr6 169331930 169332018 + 5.65293 NA Intergenic CpG 322235 NM_003247 7058 Hs.371147 NM_003247 HPRD:01766 THBS2 TSP2 thrombospondin 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_23306 chr7 64567934 64568090 + 5.64924 NA Intergenic Intergenic 69280 NR_033416 643180 Hs.510847 NR_033416 ENSG00000234585 CCT6P3 CCT6-3P chaperonin containing TCP1, subunit 6 (zeta) pseudogene 3 pseudo 21-PTNLD28-NN-CD8CAR_peak_16383 chr22 17013692 17013778 + 5.63572 NA Intergenic C-rich|Low_complexity|Low_complexity 59965 NM_014406 150160 Hs.128342 NM_014406 HPRD:16708 CCT8L2 CESK1 chaperonin containing TCP1, subunit 8 (theta)-like 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18998 chr4 49548595 49548684 + 5.62738 NA Intergenic SATR1|Satellite|Satellite 559980 NM_001286791 80157 Hs.479703 NM_025087 HPRD:08638 CWH43 CWH43-C cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_3709 chr10 69916299 69916379 + 5.59353 NA intron (NM_001256268, intron 10 of 23) intron (NM_001256268, intron 10 of 23) 47149 NM_001256268 84665 Hs.55205 NM_032578 HPRD:10536 MYPN CMD1DD|CMH22|MYOP|RCM4 myopalladin protein-coding 21-PTNLD28-NN-CD8CAR_peak_9057 chr16 16446341 16446454 + 5.56872 NA Intergenic L2b|LINE|L2 -16336 NR_106969 102466812 NR_106969 MIR6511A2 MIR6511A-2|hsa-mir-6511a-2 microRNA 6511a-2 ncRNA 21-PTNLD28-NN-CD8CAR_peak_3364 chr10 38697869 38697972 + 5.56749 NA Intergenic Intergenic -6140 NR_027269 285961 Hs.406568 NR_027269 SEPT7P9 CDC10L|SEPT7L|bA291L22.2 septin 7 pseudogene 9 pseudo 21-PTNLD28-NN-CD8CAR_peak_25827 chr9 42914508 42914673 + 5.56130 NA Intergenic Intergenic -55505 NR_046175 286297 Hs.645503 NR_046175 ENSG00000182021 LOC286297 - uncharacterized LOC286297 ncRNA 21-PTNLD28-NN-CD8CAR_peak_19390 chr4 115071010 115071163 + 5.56126 NA Intergenic L1PA3|LINE|L1 -170208 NM_024590 79642 Hs.22895 NM_024590 HPRD:08034 ARSJ - arylsulfatase family, member J protein-coding 21-PTNLD28-NN-CD8CAR_peak_12574 chr19 40624306 40624412 + 5.56126 NA Intergenic SVA_F|Other|Other -27514 NM_001142579 284323 Hs.115140 NM_001010880 HPRD:17336 ZNF780A ZNF780 zinc finger protein 780A protein-coding 21-PTNLD28-NN-CD8CAR_peak_19461 chr4 124419815 124420018 + 5.53528 NA Intergenic (TAGA)n|Simple_repeat|Simple_repeat 99271 NM_005841 10252 Hs.744854 NM_005841 HPRD:06782 SPRY1 hSPRY1 sprouty homolog 1, antagonist of FGF signaling (Drosophila) protein-coding 21-PTNLD28-NN-CD8CAR_peak_19876 chr5 9192055 9192222 + 5.50658 NA intron (NM_003966, intron 10 of 22) intron (NM_003966, intron 10 of 22) -138131 NR_039779 100616326 NR_039779 MIR4636 - microRNA 4636 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25918 chr9 66840649 66840734 + 5.50238 NA Intergenic ALR/Alpha|Satellite|centr -82276 NR_121570 101928381 Hs.708686 NR_121570 LOC101928381 - uncharacterized LOC101928381 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9099 chr16 21411474 21411587 + 5.48923 NA Intergenic L2b|LINE|L2 25128 NM_130464 23117 Hs.611072 NM_130464 NPIPB3 KIAA0220L|NPIP|NPIPB|NPIPB5|NPIPL3 nuclear pore complex interacting protein family, member B3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_8055 chr14 103528989 103529163 + 5.47729 NA Intergenic Intergenic -5334 NM_006035 9578 Hs.654634 NM_006035 HPRD:08516 CDC42BPB MRCKB CDC42 binding protein kinase beta (DMPK-like) protein-coding 21-PTNLD28-NN-CD8CAR_peak_8218 chr15 31138407 31138555 + 5.47637 NA Intergenic AluSz6|SINE|Alu 28242 NR_072991 390561 Hs.721293 NR_072991 HERC2P10 - hect domain and RLD 2 pseudogene 10 pseudo 21-PTNLD28-NN-CD8CAR_peak_18775 chr4 14488330 14488415 + 5.47521 NA Intergenic L1PA2|LINE|L1 374780 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA 21-PTNLD28-NN-CD8CAR_peak_14401 chr2 128545374 128545466 + 5.47521 NA intron (NM_001006623, intron 1 of 7) SVA_F|Other|Other 23341 NM_001006622 55339 Hs.554831 NM_018383 HPRD:11680 WDR33 NET14|WDC146 WD repeat domain 33 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27073 chrUn_gl000230 41691 41809 + 5.45723 NA NA CER|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_6388 chr12 73790828 73791065 + 5.45347 NA Intergenic L1PA2|LINE|L1 237976 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LOC101928137 - uncharacterized LOC101928137 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9066 chr16 18449936 18450055 + 5.43511 NA Intergenic L2b|LINE|L2 -12059 NR_106969 102466812 NR_106969 MIR6511A2 MIR6511A-2|hsa-mir-6511a-2 microRNA 6511a-2 ncRNA 21-PTNLD28-NN-CD8CAR_peak_19766 chr4 190598576 190598664 + 5.42335 NA Intergenic Intergenic 17860 NR_121679 101928971 Hs.519164 NR_121679 ENSG00000250739 LINC01262 TCONS_l2_00021807 long intergenic non-protein coding RNA 1262 ncRNA 21-PTNLD28-NN-CD8CAR_peak_17957 chr3 137588283 137588400 + 5.42074 NA Intergenic L1M1|LINE|L1 97588 NR_109987 100507274 Hs.360349 NR_109987 LINC01210 - long intergenic non-protein coding RNA 1210 ncRNA 21-PTNLD28-NN-CD8CAR_peak_22755 chr6 170730733 170730884 + 5.42074 NA Intergenic CpG 90959 NR_039787 100616430 NR_039787 MIR4644 - microRNA 4644 ncRNA 21-PTNLD28-NN-CD8CAR_peak_3018 chr10 1439489 1439656 + 5.40927 NA intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) -129253 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168|bA466B20.1 ADARB2 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9503 chr16 46454140 46454234 + 5.40857 NA Intergenic HSATII|Satellite|Satellite 148822 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_4167 chr10 128033335 128033448 + 5.40151 NA intron (NM_001288975, intron 1 of 18) L1PA5|LINE|L1 43736 NM_001288975 8038 Hs.594351 NM_003474 HPRD:04092 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11631 chr18 77264929 77265578 + 5.40151 NA intron (NM_172387, intron 9 of 9) intron (NM_172387, intron 9 of 9) 104979 NM_172389 4772 Hs.534074 NM_006162 HPRD:02729 NFATC1 NF-ATC|NFAT2|NFATc nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18463 chr3 194664061 194664352 + 5.36035 NA Intergenic CT-rich|Low_complexity|Low_complexity -151111 NR_104188 100874528 Hs.581659 NR_104188 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24320 chr7 158964326 158964413 + 5.35440 NA Intergenic CpG -26720 NM_003382 7434 Hs.585052 NM_003382 HPRD:03576 VIPR2 C16DUPq36.3|DUP7q36.3|PACAP-R-3|PACAP-R3|VIP-R-2|VPAC2|VPAC2R|VPCAP2R vasoactive intestinal peptide receptor 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16405 chr22 18359871 18359954 + 5.33590 NA intron (NM_001136004, intron 17 of 21) intron (NM_001136004, intron 17 of 21) 29740 NM_001122731 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_21254 chr6 1244337 1244479 + 5.31014 NA Intergenic Intergenic -68267 NM_033260 94234 Hs.591352 NM_033260 HPRD:17015 FOXQ1 HFH1 forkhead box Q1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14030 chr2 91651408 91651500 + 5.30688 NA Intergenic Intergenic 196521 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_26744 chr9_gl000199_random 116152 116305 + 5.29789 NA NA ALR/Alpha|Satellite|centr NA NA 21-PTNLD28-NN-CD8CAR_peak_3243 chr10 24946269 24946406 + 5.28723 NA intron (NM_020824, intron 4 of 25) SVA_F|Other|Other 66260 NM_020824 57584 Hs.524195 NM_020824 HPRD:06445 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19742 chr4 188912738 188912893 + 5.28723 NA Intergenic SVA_D|Other|Other -4110 NM_174900 132625 Hs.335787 NM_174900 HPRD:15726 ZFP42 REX1|ZNF754 ZFP42 zinc finger protein protein-coding 21-PTNLD28-NN-CD8CAR_peak_1237 chr1 99979631 99979711 + 5.28261 NA Intergenic HERVH-int|LTR|ERV1 -131760 NM_017734 54873 Hs.483993 NM_017734 HPRD:06673 PALMD C1orf11|PALML palmdelphin protein-coding 21-PTNLD28-NN-CD8CAR_peak_4247 chr11 194582 194875 + 5.26167 NA TTS (NM_145651) TTS (NM_145651) 1648 NM_145651 147199 Hs.127059 NM_145651 HPRD:18024 SCGB1C1 RYD5 secretoglobin, family 1C, member 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6346 chr12 70005821 70005901 + 5.25593 NA promoter-TSS (NM_201550) promoter-TSS (NM_201550) -919 NM_201550 376132 Hs.448708 NM_201550 HPRD:17449 LRRC10 HRLRRP|LRRC10A leucine rich repeat containing 10 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3916 chr10 94434815 94435199 + 5.25593 NA Intergenic SVA_F|Other|Other -14674 NM_002729 3087 Hs.118651 NM_002729 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding 21-PTNLD28-NN-CD8CAR_peak_1271 chr1 105654002 105654082 + 5.25593 NA Intergenic HERV9-int|LTR|ERV1 1038397 NR_033990 100129138 Hs.514487 NR_033990 ENSG00000215869 LOC100129138 - THAP domain containing, apoptosis associated protein 3 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_22709 chr6 167197389 167197629 + 5.25593 NA intron (NM_001006932, intron 2 of 21) CpG 78262 NM_001006932 6196 Hs.655277 NM_021135 HPRD:03403 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|pp90RSK3 ribosomal protein S6 kinase, 90kDa, polypeptide 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4077 chr10 113826251 113826485 + 5.25593 NA Intergenic L1PA2|LINE|L1 117169 NM_001244949 57678 Hs.42586 NM_020918 HPRD:03865 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding 21-PTNLD28-NN-CD8CAR_peak_20067 chr5 43087235 43087330 + 5.23549 NA intron (NR_102752, intron 2 of 2) SVA_E|Other|Other -19741 NR_104651 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA 21-PTNLD28-NN-CD8CAR_peak_18782 chr4 15282279 15282420 + 5.22837 NA Intergenic L1PA2|LINE|L1 -59211 NM_001135170 114905 Hs.153714 NM_031911 HPRD:16633 C1QTNF7 CTRP7|ZACRP7 C1q and tumor necrosis factor related protein 7 protein-coding 21-PTNLD28-NN-CD8CAR_peak_24729 chr8 43823734 43823821 + 5.21552 NA Intergenic ALR/Alpha|Satellite|centr 676192 NM_001005365 340441 Hs.531579 NM_001002920 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family, member A protein-coding 21-PTNLD28-NN-CD8CAR_peak_13973 chr2 89831634 89831717 + 5.20858 NA Intergenic HSATII|Satellite|Satellite 719791 NR_039635 100616399 NR_039635 miRBase:MI0016776 MIR4436A - microRNA 4436a ncRNA 21-PTNLD28-NN-CD8CAR_peak_13946 chr2 87730446 87730642 + 5.20789 NA Intergenic (CAGC)n|Simple_repeat|Simple_repeat -24430 NR_024204 112597 Hs.652166 NM_052871 HPRD:14654 LINC00152 C2orf59|NCRNA00152 long intergenic non-protein coding RNA 152 ncRNA 21-PTNLD28-NN-CD8CAR_peak_26739 chr9_gl000199_random 106148 106256 + 5.19952 NA NA ALR/Alpha|Satellite|centr NA NA 21-PTNLD28-NN-CD8CAR_peak_16404 chr22 18359618 18359706 + 5.19194 NA intron (NM_001136004, intron 17 of 21) (TTAGG)n|Simple_repeat|Simple_repeat 29990 NM_001122731 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26286 chr9 103458308 103458478 + 5.19194 NA Intergenic L1PA2|LINE|L1 118032 NM_001018116 347273 Hs.99004 NM_001018116 HPRD:18599 MURC CAVIN4|cavin-4 muscle-related coiled-coil protein protein-coding 21-PTNLD28-NN-CD8CAR_peak_23343 chr7 66747323 66747449 + 5.18302 NA intron (NR_046299, intron 5 of 5) intron (NR_046299, intron 5 of 5) 20043 NR_046299 5382 Hs.712714 NR_022007 ENSG00000067601 PMS2P4 PMS2L4|PMS6 postmeiotic segregation increased 2 pseudogene 4 pseudo 21-PTNLD28-NN-CD8CAR_peak_23059 chr7 39316231 39316311 + 5.18233 NA intron (NM_001166018, intron 5 of 10) L1PA3|LINE|L1 129674 NR_046711 100861520 Hs.571292 NR_046711 ENSG00000224122 POU6F2-AS1 - POU6F2 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_2126 chr1 162977089 162977218 + 5.18233 NA Intergenic AluYh9|SINE|Alu -61243 NM_001102445 5999 Hs.386726 NM_005613 HPRD:03947 RGS4 RGP4|SCZD9 regulator of G-protein signaling 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_12388 chr19 33813407 33813592 + 5.18233 NA Intergenic AluYc3|SINE|Alu 19736 NR_026887 80054 Hs.287521 NM_024988 HPRD:07766 CEBPA-AS1 - CEBPA antisense RNA 1 (head to head) ncRNA 21-PTNLD28-NN-CD8CAR_peak_18839 chr4 34223054 34223143 + 5.18233 NA Intergenic AluYb8|SINE|Alu -2022640 NR_122079 439933 Hs.591071 NR_122079 ENSG00000247193 LOC439933 - uncharacterized LOC439933 ncRNA 21-PTNLD28-NN-CD8CAR_peak_27152 chrX 10087605 10087741 + 5.18233 NA intron (NM_015691, intron 11 of 22) intron (NM_015691, intron 11 of 22) -37312 NM_001256944 1183 Hs.495674 NM_001830 HPRD:02362 CLCN4 CLC4|ClC-4|ClC-4A chloride channel, voltage-sensitive 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_23486 chr7 76167040 76167168 + 5.18233 NA Intergenic Intergenic -11554 NR_029411 100133091 Hs.712837 NR_029411 ENSG00000205485 LOC100133091 - uncharacterized LOC100133091 ncRNA 21-PTNLD28-NN-CD8CAR_peak_15158 chr2 235663976 235664056 + 5.18233 NA Intergenic L1PA3|LINE|L1 -196612 NM_014521 23677 Hs.516777 NM_014521 HPRD:09285 SH3BP4 BOG25|TTP SH3-domain binding protein 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18290 chr3 180179437 180179672 + 5.18233 NA Intergenic L1PA3|LINE|L1 -140364 NM_133462 151613 Hs.43213 NM_133462 HPRD:15579 TTC14 DRDL5813|PRO19630 tetratricopeptide repeat domain 14 protein-coding 21-PTNLD28-NN-CD8CAR_peak_7018 chr13 44408880 44408973 + 5.18233 NA Intergenic L1PA4|LINE|L1 -44494 NM_001128303 144811 Hs.210586 NM_153218 HPRD:08793 LACC1 C13orf31 laccase (multicopper oxidoreductase) domain containing 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14101 chr2 96233147 96233227 + 5.18233 NA Intergenic LTR5A|LTR|ERVK -24579 NM_138800 129868 Hs.232026 NM_138800 HPRD:15560 TRIM43 TRIM43A tripartite motif containing 43 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19239 chr4 88858211 88858368 + 5.18233 NA Intergenic HERVH-int|LTR|ERV1 -38513 NM_001040060 6696 Hs.313 NM_000582 HPRD:01325 SPP1 BNSP|BSPI|ETA-1|OPN secreted phosphoprotein 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_10201 chr17 11767960 11768057 + 5.18233 NA intron (NM_001372, intron 50 of 68) L1PA3|LINE|L1 -18211 NM_004662 1770 Hs.567259 NM_001372 HPRD:04511 DNAH9 DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20 dynein, axonemal, heavy chain 9 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6378 chr12 73663082 73663207 + 5.18233 NA Intergenic L1PA4|LINE|L1 110174 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LOC101928137 - uncharacterized LOC101928137 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9546 chr16 50597585 50597852 + 5.18233 NA intron (NM_033119, intron 3 of 9) intron (NM_033119, intron 3 of 9) 15477 NM_033119 85407 Hs.187578 NM_033119 NKD1 Naked1 naked cuticle homolog 1 (Drosophila) protein-coding 21-PTNLD28-NN-CD8CAR_peak_27115 chrX 459037 459139 + 5.18233 NA Intergenic Intergenic -111398 NM_013239 28227 Hs.124942 NM_013239 HPRD:02276 PPP2R3B NYREN8|PPP2R3L|PPP2R3LY|PR48 protein phosphatase 2, regulatory subunit B'', beta protein-coding 21-PTNLD28-NN-CD8CAR_peak_24491 chr8 21115184 21115264 + 5.18233 NA Intergenic AluSx1|SINE|Alu -40526 NR_104677 101929172 Hs.128668 NR_104677 ENSG00000254334 LOC101929172 - uncharacterized LOC101929172 ncRNA 21-PTNLD28-NN-CD8CAR_peak_28101 chrY 17059155 17059239 + 5.18233 NA Intergenic L1PA3|LINE|L1 -143284 NR_046504 100874056 Hs.743197 NR_046504 ENSG00000228787 NLGN4Y-AS1 NLGN4Y-AS|NLGN4YAS NLGN4Y antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_4316 chr11 3220563 3220741 + 5.15921 NA Intergenic Intergenic -18910 NR_027138 283303 Hs.151154 NM_173590 HPRD:08770 MRGPRG-AS1 C11orf36|HSD-40 MRGPRG antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_16347 chr21 47218368 47218448 + 5.15921 NA Intergenic (TGGA)n|Simple_repeat|Simple_repeat 37925 NR_038876 100129027 Hs.689591 NR_038876 ENSG00000205424 LOC100129027 - uncharacterized LOC100129027 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24354 chr8 1800455 1800630 + 5.15519 NA intron (NM_014629, intron 2 of 28) intron (NM_014629, intron 2 of 28) 28393 NM_014629 9639 Hs.98594 NM_014629 HPRD:09735 ARHGEF10 GEF10 Rho guanine nucleotide exchange factor (GEF) 10 protein-coding 21-PTNLD28-NN-CD8CAR_peak_5240 chr11 85693547 85693712 + 5.15519 NA intron (NM_001008660, intron 13 of 19) AluYb8|SINE|Alu 86510 NM_001008660 8301 Hs.163893 NM_007166 HPRD:04320 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding 21-PTNLD28-NN-CD8CAR_peak_27886 chrY 409037 409139 + 5.15519 NA Intergenic Intergenic -111398 NM_013239 28227 Hs.124942 NM_013239 HPRD:02276 PPP2R3B NYREN8|PPP2R3L|PPP2R3LY|PR48 protein phosphatase 2, regulatory subunit B'', beta protein-coding 21-PTNLD28-NN-CD8CAR_peak_24391 chr8 7152153 7152245 + 5.14842 NA Intergenic Intergenic -8319 NR_027000 349196 Hs.559040 NM_001025473 LINC00965 - long intergenic non-protein coding RNA 965 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9139 chr16 22545133 22545236 + 5.14647 NA exon (NM_001135865, exon 7 of 7) exon (NM_001135865, exon 7 of 7) -11835 NR_003676 653786 Hs.564945 NR_003676 ENSG00000257838 LOC653786 - otoancorin pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_11593 chr18 72672234 72672321 + 5.13637 NA intron (NM_017757, intron 7 of 7) intron (NM_017757, intron 7 of 7) 249004 NM_175907 284273 Hs.465433 NM_175907 ZADH2 - zinc binding alcohol dehydrogenase domain containing 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26783 chrUn_gl000211 58229 58347 + 5.13637 NA intron (NR_033856, intron 3 of 6) AluJo|SINE|Alu 9785 NR_033856 644316 Hs.632789 NR_033856 FLJ43315 - asparagine synthetase pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_7718 chr14 64202022 64202126 + 5.13637 NA Intergenic AluY|SINE|Alu -7318 NM_030791 81537 Hs.24678 NM_030791 HPRD:10226 SGPP1 SPPase1 sphingosine-1-phosphate phosphatase 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19942 chr5 17590873 17590978 + 5.11653 NA Intergenic Intergenic -203506 NR_033975 401177 Hs.508311 NR_033975 ENSG00000250822 LOC401177 - uncharacterized LOC401177 ncRNA 21-PTNLD28-NN-CD8CAR_peak_18935 chr4 49144154 49144234 + 5.11398 NA Intergenic (CATTC)n|Satellite|Satellite 155535 NM_001286791 80157 Hs.479703 NM_025087 HPRD:08638 CWH43 CWH43-C cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_25425 chr8 143323377 143323543 + 5.11110 NA intron (NM_145003, intron 12 of 13) L1M4|LINE|L1 43743 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA 21-PTNLD28-NN-CD8CAR_peak_2909 chr1 237832871 237833011 + 5.11110 NA intron (NM_001035, intron 58 of 104) SVA_D|Other|Other -192534 NR_027247 100130331 Hs.661736 NR_027247 ENSG00000237250 LOC100130331 - POTE ankyrin domain family, member F pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_6915 chr13 25309824 25309904 + 5.09571 NA Intergenic AluY|SINE|Alu -28437 NM_001184993 56163 Hs.97464 NM_031277 HPRD:05779 RNF17 Mmip-2|SPATA23|TDRD4 ring finger protein 17 protein-coding 21-PTNLD28-NN-CD8CAR_peak_25954 chr9 68468992 68469143 + 5.09515 NA Intergenic L1MA6|LINE|L1 -14692 NR_033907 642236 Hs.529357 NR_033907 LOC642236 - FSHD region gene 1 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_13242 chr2 3289492 3289610 + 5.09066 NA intron (NM_003310, intron 3 of 8) CpG 92102 NM_003310 7260 Hs.502770 NM_003310 HPRD:10287 TSSC1 - tumor suppressing subtransferable candidate 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27669 chrX 115004093 115004184 + 5.09039 NA Intergenic CpG 176319 NM_001282338 5358 Hs.496622 NM_005032 HPRD:02133 PLS3 BMND18|T-plastin plastin 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14027 chr2 91600745 91600829 + 5.06802 NA Intergenic HSATII|Satellite|Satellite 247188 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_15576 chr20 35192787 35192884 + 5.06758 NA intron (NR_109939, intron 2 of 4) L1M4|LINE|L1 8843 NR_109939 101926987 Hs.647444 NR_109939 DLGAP4-AS1 - DLGAP4 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_22430 chr6 122484570 122484654 + 5.06025 NA Intergenic AluYb8|SINE|Alu -236084 NM_001135564 3298 Hs.158195 NM_004506 HPRD:00779 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_15221 chr2 242509832 242510210 + 5.06025 NA intron (NM_032515, intron 4 of 4) intron (NM_032515, intron 4 of 4) -11463 NR_033346 100379249 Hs.621128 NR_033346 BOK-AS1 BOK-AS|BOKAS|NAToB|NCRNA00151 BOK antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_13170 chr19_gl000208_random 88542 88747 + 5.03542 NA NA ALR/Alpha|Satellite|centr NA NA 21-PTNLD28-NN-CD8CAR_peak_12650 chr19 43314849 43314929 + 5.03475 NA Intergenic L1HS|LINE|L1 -11126 NR_036584 100289650 Hs.680622 NR_036584 ENSG00000225877 LOC100289650 - uncharacterized LOC100289650 ncRNA 21-PTNLD28-NN-CD8CAR_peak_17941 chr3 134749943 134750023 + 5.03475 NA intron (NM_004441, intron 3 of 15) L1PA3|LINE|L1 235884 NM_004441 2047 Hs.116092 NM_004441 HPRD:02790 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_13015 chr19 55462413 55462493 + 5.03475 NA Intergenic LTR5_Hs|LTR|ERVK -3580 NM_206828 199713 Hs.351118 NM_139176 HPRD:10112 NLRP7 CLR19.4|HYDM|NALP7|NOD12|PAN7|PYPAF3 NLR family, pyrin domain containing 7 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11811 chr19 6070081 6070176 + 5.00867 NA intron (NM_000635, intron 1 of 17) (GGATG)n|Simple_repeat|Simple_repeat 40536 NM_000635 5990 Hs.465709 NM_000635 HPRD:00824 RFX2 - regulatory factor X, 2 (influences HLA class II expression) protein-coding 21-PTNLD28-NN-CD8CAR_peak_12963 chr19 53315125 53315364 + 4.98393 NA intron (NM_006969, intron 2 of 3) SVA_E|Other|Other 9678 NR_036600 7576 Hs.732407 NM_006969 HPRD:18507 ZNF28 KOX24 zinc finger protein 28 protein-coding 21-PTNLD28-NN-CD8CAR_peak_1508 chr1 143242390 143242509 + 4.97539 NA Intergenic SATR1|Satellite|Satellite -40210 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA 21-PTNLD28-NN-CD8CAR_peak_18671 chr4 6005495 6005595 + 4.95677 NA Intergenic (ATG)n|Simple_repeat|Simple_repeat -80490 NR_039608 100616201 NR_039608 miRBase:MI0016749 MIR378D1 - microRNA 378d-1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_3260 chr10 26923450 26923687 + 4.95677 NA Intergenic L1PA4|LINE|L1 -8469 NR_026794 731789 Hs.178186 NR_026794 ENSG00000231976 LINC00202-2 - long intergenic non-protein coding RNA 202-2 ncRNA 21-PTNLD28-NN-CD8CAR_peak_21133 chr5 175460609 175460885 + 4.93519 NA Intergenic Intergenic 28311 NR_103794 100996385 Hs.382347 NR_103794 ENSG00000248469 LOC100996385 - uncharacterized LOC100996385 ncRNA 21-PTNLD28-NN-CD8CAR_peak_10437 chr17 31249969 31250113 + 4.93457 NA Intergenic SVA_E|Other|Other -4887 NM_015544 26022 Hs.3447 NM_015544 HPRD:13171 TMEM98 - transmembrane protein 98 protein-coding 21-PTNLD28-NN-CD8CAR_peak_21410 chr6 13454935 13455043 + 4.93457 NA intron (NM_018988, intron 1 of 1) intron (NM_018988, intron 1 of 1) 17306 NR_038459 54438 Hs.484686 NM_018988 HPRD:13574 GFOD1 ADG-90|C6orf114 glucose-fructose oxidoreductase domain containing 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19967 chr5 30493026 30493162 + 4.93112 NA Intergenic HERVK-int|LTR|ERVK -700668 NM_004932 1004 Hs.124776 NM_004932 HPRD:04305 CDH6 CAD6|KCAD cadherin 6, type 2, K-cadherin (fetal kidney) protein-coding 21-PTNLD28-NN-CD8CAR_peak_6829 chr12 128770354 128770462 + 4.92298 NA intron (NM_001136103, intron 1 of 8) CT-rich|Low_complexity|Low_complexity -8229 NR_037406 100500817 NR_037406 MIR3612 - microRNA 3612 ncRNA 21-PTNLD28-NN-CD8CAR_peak_23833 chr7 120544792 120544872 + 4.92298 NA Intergenic L1PA6|LINE|L1 -45985 NM_019071 54556 Hs.489811 NM_019071 HPRD:06321 ING3 Eaf4|ING2|MEAF4|p47ING3 inhibitor of growth family, member 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27719 chrX 128219213 128219293 + 4.92298 NA Intergenic L1PA3|LINE|L1 438229 NM_001282874 6594 Hs.152292 NM_003069 HPRD:02055 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19549 chr4 147207853 147207940 + 4.91289 NA intron (NM_001029998, intron 9 of 11) intron (NM_001029998, intron 9 of 11) 111061 NM_007080 11157 Hs.190520 NM_007080 HPRD:06286 LSM6 YDR378C LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_27677 chrX 116965212 116965292 + 4.89498 NA Intergenic L1PA3|LINE|L1 142449 NM_033495 90293 Hs.348262 NM_033495 HPRD:06461 KLHL13 BKLHD2 kelch-like family member 13 protein-coding 21-PTNLD28-NN-CD8CAR_peak_7224 chr13 104158441 104158538 + 4.89498 NA Intergenic L1PA4|LINE|L1 -223641 NR_049840 100847092 NR_049840 MIR548AS - microRNA 548as ncRNA 21-PTNLD28-NN-CD8CAR_peak_13224 chr2 1584820 1585012 + 4.89498 NA Intergenic Intergenic 163403 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin homolog (Drosophila) protein-coding 21-PTNLD28-NN-CD8CAR_peak_3831 chr10 78579203 78579283 + 4.88569 NA Intergenic HERVH-int|LTR|ERV1 -68559 NR_120655 101929328 Hs.664552 NR_120655 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_1689 chr1 148010903 148010983 + 4.88220 NA exon (NM_001037501, exon 14 of 20) exon (NM_001037501, exon 14 of 20) 16797 NR_104086 101954277 NR_104086 RNVU1-19 RNU1-126|RNU1-147|RNVU1-13|vU1.13|vU1.19 RNA, variant U1 small nuclear 19 snRNA 21-PTNLD28-NN-CD8CAR_peak_24836 chr8 57934114 57934220 + 4.83951 NA Intergenic SVA_D|Other|Other -27737 NM_017813 54928 Hs.438689 NM_017813 HPRD:06531 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_2639 chr1 218772116 218772196 + 4.83747 NA Intergenic HERVH-int|LTR|ERV1 156188 NR_125715 103611157 Hs.133379 NR_125715 TGFB2-OT1 - TGFB2 overlapping transcript 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_1001 chr1 63939729 63939985 + 4.82685 NA intron (NR_045147, intron 4 of 9) SVA_E|Other|Other 49087 NM_001206739 23421 Hs.166539 NM_014288 HPRD:09267 ITGB3BP CENP-R|CENPR|HSU37139|NRIF3|TAP20 integrin beta 3 binding protein (beta3-endonexin) protein-coding 21-PTNLD28-NN-CD8CAR_peak_2642 chr1 220018172 220018313 + 4.82685 NA Intergenic L1PA3|LINE|L1 -28377 NR_002753 26828 NR_002753 ENSG00000199377 RNU5F-1 RNU5F|U5F RNA, U5F small nuclear 1 snRNA 21-PTNLD28-NN-CD8CAR_peak_18503 chr3 195976902 195976982 + 4.82650 NA intron (NM_005017, intron 4 of 9) intron (NM_005017, intron 4 of 9) 33559 NM_152672 200931 Hs.630585 NM_152672 HPRD:17810 SLC51A OSTA|OSTalpha solute carrier family 51, alpha subunit protein-coding 21-PTNLD28-NN-CD8CAR_peak_25677 chr9 33251949 33252168 + 4.81285 NA TTS (NM_001172415) TTS (NM_001172415) 11862 NM_014471 27290 Hs.555934 NM_014471 HPRD:11598 SPINK4 HEL136|PEC-60|PEC60 serine peptidase inhibitor, Kazal type 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27794 chrX 149236018 149236106 + 4.81220 NA Intergenic L1PA4|LINE|L1 129296 NR_027456 100272228 Hs.496916 NR_027456 ENSG00000235703 LINC00894 - long intergenic non-protein coding RNA 894 ncRNA 21-PTNLD28-NN-CD8CAR_peak_23499 chr7 76686100 76686254 + 4.79484 NA Intergenic Intergenic 17380 NR_028058 100132832 Hs.292996 NM_001129851 PMS2P9 PMS2L17|PMS2LP1|PMSR5 postmeiotic segregation increased 2 pseudogene 9 pseudo 21-PTNLD28-NN-CD8CAR_peak_10004 chr17 165119 165328 + 4.79093 NA intron (NM_001190411, intron 4 of 8) intron (NM_001190411, intron 4 of 8) -15773 NM_001242780 100506388 Hs.627744 NM_001242780 LOC100506388 - uncharacterized LOC100506388 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19859 chr5 6101770 6101882 + 4.78891 NA Intergenic (CACCC)n|Simple_repeat|Simple_repeat 235579 NR_028351 401172 Hs.376760 NM_001001702 HPRD:16934 FLJ33360 - FLJ33360 protein ncRNA 21-PTNLD28-NN-CD8CAR_peak_17057 chr3 18370272 18370413 + 4.78891 NA Intergenic L1PA3|LINE|L1 96487 NM_002971 6304 Hs.517717 NM_002971 HPRD:03647 SATB1 - SATB homeobox 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14005 chr2 90293265 90293412 + 4.78745 NA Intergenic C-rich|Low_complexity|Low_complexity 1181454 NR_039635 100616399 NR_039635 miRBase:MI0016776 MIR4436A - microRNA 4436a ncRNA 21-PTNLD28-NN-CD8CAR_peak_14055 chr2 92282192 92282307 + 4.78160 NA Intergenic ALR/Alpha|Satellite|centr 153090 NR_027714 440888 Hs.730239 NM_001032412 ENSG00000226481 ACTR3BP2 FKSG73 ACTR3B pseudogene 2 pseudo 21-PTNLD28-NN-CD8CAR_peak_22195 chr6 78626980 78627081 + 4.75787 NA intron (NM_001282136, intron 3 of 3) L1PA2|LINE|L1 226657 NM_001282136 101928601 NM_001282136 MEI4 - meiosis-specific 4 homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_21380 chr6 10786806 10786987 + 4.74194 NA intron (NM_005906, intron 10 of 13) intron (NM_005906, intron 10 of 13) 38904 NR_104454 81853 Hs.95600 NM_030969 HPRD:15523 TMEM14B - transmembrane protein 14B protein-coding 21-PTNLD28-NN-CD8CAR_peak_22431 chr6 122552088 122552168 + 4.74194 NA Intergenic L1PA5|LINE|L1 -168568 NM_001135564 3298 Hs.158195 NM_004506 HPRD:00779 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6464 chr12 96234522 96234628 + 4.73074 NA Intergenic SVA_E|Other|Other -18134 NM_003095 6636 Hs.105465 NM_003095 SNRPF SMF|Sm-F|snRNP-F small nuclear ribonucleoprotein polypeptide F protein-coding 21-PTNLD28-NN-CD8CAR_peak_4040 chr10 105795863 105795977 + 4.73074 NA intron (NM_000494, intron 48 of 55) (TG)n|Simple_repeat|Simple_repeat 12024 NR_030760 100126326 NR_030760 MIR936 MIRN936|hsa-mir-936 microRNA 936 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25848 chr9 44876189 44876390 + 4.72542 NA Intergenic SST1|Satellite|centr -113947 NR_027421 100132948 Hs.645763 NM_001024942 ENSG00000154537 FAM27C FAM27A|FAM27A1|FAM27A3 family with sequence similarity 27, member C ncRNA 21-PTNLD28-NN-CD8CAR_peak_14010 chr2 90379245 90379340 + 4.72323 NA Intergenic HSATII|Satellite|Satellite 1267408 NR_039635 100616399 NR_039635 miRBase:MI0016776 MIR4436A - microRNA 4436a ncRNA 21-PTNLD28-NN-CD8CAR_peak_9890 chr16 86267449 86267531 + 4.72117 NA intron (NR_104139, intron 3 of 5) L1PA3|LINE|L1 37703 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA 21-PTNLD28-NN-CD8CAR_peak_14472 chr2 133044722 133044893 + 4.69353 NA Intergenic ACRO1|Satellite|acro -29265 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo 21-PTNLD28-NN-CD8CAR_peak_1465 chr1 121437713 121437801 + 4.67471 NA Intergenic ALR/Alpha|Satellite|centr 176847 NR_003955 647121 Hs.697682 NR_003955 EMBP1 - embigin pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_12349 chr19 29954806 29954893 + 4.67184 NA intron (NR_040029, intron 1 of 9) L1PA2|LINE|L1 61810 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9508 chr16 46482706 46482792 + 4.65966 NA Intergenic Intergenic 120260 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_15995 chr21 9704485 9704582 + 4.65815 NA Intergenic TAR1|Satellite|telo -121299 NR_037421 100500862 NR_037421 MIR3648-1 MIR3648 microRNA 3648-1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_3332 chr10 33338186 33338266 + 4.65063 NA Intergenic LTR12C|LTR|ERV1 -90933 NM_002211 3688 Hs.643813 NM_002211 HPRD:00628 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) protein-coding 21-PTNLD28-NN-CD8CAR_peak_4122 chr10 122200935 122201025 + 4.65063 NA Intergenic L1PA3|LINE|L1 -15486 NM_001030059 196051 Hs.40479 NM_001030059 HPRD:18745 PPAPDC1A DPPL2|PPAPDC1 phosphatidic acid phosphatase type 2 domain containing 1A protein-coding 21-PTNLD28-NN-CD8CAR_peak_23184 chr7 56442079 56442364 + 4.62413 NA Intergenic Intergenic 73847 NR_029420 650226 Hs.448401 NR_029420 LOC650226 - ankyrin repeat domain 26 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_11142 chr17 80348642 80348776 + 4.60222 NA non-coding (NR_033265, exon 10 of 10) non-coding (NR_033265, exon 10 of 10) 16508 NM_018949 2837 Hs.192720 NM_018949 HPRD:02938 UTS2R GPR14|UR-2-R|UTR|UTR2 urotensin 2 receptor protein-coding 21-PTNLD28-NN-CD8CAR_peak_45 chr1 1317722 1317808 + 4.57953 NA Intergenic Intergenic -6947 NM_017900 54998 Hs.632515 NM_017900 HPRD:16457 AURKAIP1 AIP|AKIP|MRP-S38 aurora kinase A interacting protein 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_2027 chr1 158731866 158732108 + 4.57272 NA Intergenic L1PA2|LINE|L1 4485 NM_001005185 128372 Hs.553592 NM_001005185 HPRD:15066 OR6N1 OR1-22 olfactory receptor, family 6, subfamily N, member 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_13314 chr2 10676678 10676815 + 4.53497 NA Intergenic Intergenic 86892 NR_110597 101929715 Hs.634550 NR_110597 LOC101929715 - uncharacterized LOC101929715 ncRNA 21-PTNLD28-NN-CD8CAR_peak_26875 chrUn_gl000217 45358 45438 + 4.52167 NA NA G-rich|Low_complexity|Low_complexity NA NA 21-PTNLD28-NN-CD8CAR_peak_16592 chr22 29905777 29905869 + 4.52116 NA intron (NM_001002877, intron 20 of 20) intron (NM_001002877, intron 20 of 20) 29642 NM_021076 4744 Hs.198760 NM_021076 HPRD:01204 NEFH NFH neurofilament, heavy polypeptide protein-coding 21-PTNLD28-NN-CD8CAR_peak_26102 chr9 85387821 85387941 + 4.51233 NA Intergenic L1PA2|LINE|L1 290162 NM_152573 158158 Hs.129136 NM_152573 HPRD:08337 RASEF RAB45 RAS and EF-hand domain containing protein-coding 21-PTNLD28-NN-CD8CAR_peak_3019 chr10 1635065 1635254 + 4.51233 NA intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) 66334 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168|bA466B20.1 ADARB2 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9510 chr16 46498990 46499131 + 4.49905 NA Intergenic HSATII|Satellite|Satellite 103949 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_18925 chr4 49131117 49131241 + 4.48197 NA Intergenic (CATTC)n|Satellite|Satellite 142520 NM_001286791 80157 Hs.479703 NM_025087 HPRD:08638 CWH43 CWH43-C cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_18568 chr4 709381 709567 + 4.47432 NA intron (NM_006315, intron 1 of 10) intron (NM_006315, intron 1 of 10) 9901 NM_006315 10336 Hs.144309 NM_006315 HPRD:11515 PCGF3 DONG1|RNF3|RNF3A polycomb group ring finger 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11586 chr18 71676742 71676884 + 4.46826 NA Intergenic L1PA3|LINE|L1 138186 NM_152676 201456 Hs.664011 NM_152676 HPRD:16435 FBXO15 FBX15 F-box protein 15 protein-coding 21-PTNLD28-NN-CD8CAR_peak_10112 chr17 6393199 6393294 + 4.44565 NA intron (NM_031220, intron 4 of 19) AluSg|SINE|Alu 45511 NM_019013 54478 Hs.592116 NM_019013 HPRD:07649 FAM64A CATS|RCS1 family with sequence similarity 64, member A protein-coding 21-PTNLD28-NN-CD8CAR_peak_18759 chr4 10147152 10147281 + 4.42380 NA Intergenic CpG -28643 NM_017491 9948 Hs.128548 NM_005112 HPRD:09199 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26167 chr9 93991363 93991443 + 4.42093 NA intron (NM_001698, intron 6 of 9) L1PA3|LINE|L1 132803 NM_001698 549 Hs.175905 NM_001698 HPRD:08987 AUH - AU RNA binding protein/enoyl-CoA hydratase protein-coding 21-PTNLD28-NN-CD8CAR_peak_27978 chrY 13455729 13455819 + 4.41917 NA Intergenic (CATTC)n|Satellite|Satellite 1077615 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_2958 chr1 246188004 246188374 + 4.38021 NA intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 392525 NM_022743 64754 Hs.567571 NM_022743 HPRD:12297 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14007 chr2 90372119 90372283 + 4.37970 NA Intergenic HSATII|Satellite|Satellite 1260317 NR_039635 100616399 NR_039635 miRBase:MI0016776 MIR4436A - microRNA 4436a ncRNA 21-PTNLD28-NN-CD8CAR_peak_20023 chr5 38862023 38862103 + 4.37128 NA intron (NM_003999, intron 1 of 17) SVA_D|Other|Other 15962 NM_003999 9180 Hs.120658 NM_003999 HPRD:03446 OSMR OSMRB|PLCA1 oncostatin M receptor protein-coding 21-PTNLD28-NN-CD8CAR_peak_22726 chr6 168758673 168758826 + 4.36064 NA Intergenic Intergenic -38315 NM_214462 168002 Hs.673059 NM_214462 HPRD:12345 DACT2 C6orf116|DAPPER2|DPR2|bA503C24.7 dishevelled-binding antagonist of beta-catenin 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11622 chr18 76798764 76798847 + 4.36064 NA Intergenic Intergenic -30592 NM_198531 374868 Hs.465475 NM_198531 HPRD:16528 ATP9B ATPASEP|ATPIIB|NEO1L|hMMR1 ATPase, class II, type 9B protein-coding 21-PTNLD28-NN-CD8CAR_peak_27969 chrY 13352797 13352880 + 4.35922 NA Intergenic Intergenic 1180551 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_27093 chrUn_gl000240 15418 15506 + 4.34693 NA NA Intergenic NA NA 21-PTNLD28-NN-CD8CAR_peak_4715 chr11 50767614 50767694 + 4.31036 NA Intergenic ALR/Alpha|Satellite|centr 399336 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DEAH (Asp-Glu-Ala-His) box helicase 9 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_19935 chr5 17521978 17522132 + 4.30333 NA Intergenic Intergenic -134636 NR_033975 401177 Hs.508311 NR_033975 ENSG00000250822 LOC401177 - uncharacterized LOC401177 ncRNA 21-PTNLD28-NN-CD8CAR_peak_27772 chrX 139806300 139806414 + 4.29969 NA intron (NR_104228, intron 2 of 3) (CA)n|Simple_repeat|Simple_repeat 14433 NR_104228 286411 Hs.317627 NR_028344 ENSG00000203930 LINC00632 - long intergenic non-protein coding RNA 632 ncRNA 21-PTNLD28-NN-CD8CAR_peak_5242 chr11 85822106 85822204 + 4.28466 NA Intergenic SVA_D|Other|Other -41232 NM_001206947 8301 Hs.163893 NM_007166 HPRD:04320 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding 21-PTNLD28-NN-CD8CAR_peak_5921 chr12 29975728 29975865 + 4.28099 NA Intergenic L1PA3|LINE|L1 -38104 NM_175861 83857 Hs.401954 NM_175861 HPRD:12472 TMTC1 OLF|TMTC1A transmembrane and tetratricopeptide repeat containing 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27718 chrX 128183938 128184103 + 4.28099 NA Intergenic L1PA2|LINE|L1 473462 NM_001282874 6594 Hs.152292 NM_003069 HPRD:02055 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_20009 chr5 36892516 36892661 + 4.28099 NA intron (NM_015384, intron 1 of 45) L1PA5|LINE|L1 15727 NM_133433 25836 Hs.481927 NM_015384 HPRD:10560 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 Nipped-B homolog (Drosophila) protein-coding 21-PTNLD28-NN-CD8CAR_peak_19250 chr4 89681559 89681665 + 4.28099 NA intron (NM_001015045, intron 7 of 17) AluYh9|SINE|Alu 50672 NR_002806 285512 Hs.744957 NR_002806 ENSG00000248019 FAM13A-AS1 FAM13A1OS|FAM13AOS|NCRNA00039 FAM13A antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_27486 chrX 67024005 67024088 + 4.28099 NA Intergenic L1PA5|LINE|L1 235363 NM_001011645 367 Hs.76704 NM_000044 HPRD:02437 AR AIS|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding 21-PTNLD28-NN-CD8CAR_peak_24381 chr8 5611983 5612063 + 4.28099 NA Intergenic Intergenic 652046 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA 21-PTNLD28-NN-CD8CAR_peak_6326 chr12 68799924 68800004 + 4.28099 NA Intergenic Intergenic 45300 NR_120458 100507195 Hs.450772 NR_120458 LOC100507195 - uncharacterized LOC100507195 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25585 chr9 6999470 6999559 + 4.28099 NA intron (NM_001146696, intron 12 of 17) AluYh9|SINE|Alu 241873 NM_015061 23081 Hs.709425 NM_015061 HPRD:12016 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C|bA146B14.1 lysine (K)-specific demethylase 4C protein-coding 21-PTNLD28-NN-CD8CAR_peak_27264 chrX 44460528 44460690 + 4.28099 NA Intergenic (TATATG)n|Simple_repeat|Simple_repeat -58388 NM_173794 139341 Hs.7549 NM_173794 HPRD:06658 FUNDC1 - FUN14 domain containing 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19964 chr5 27400302 27400419 + 4.28099 NA Intergenic L1MA4|LINE|L1 -72039 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 LINC01021 - long intergenic non-protein coding RNA 1021 ncRNA 21-PTNLD28-NN-CD8CAR_peak_26574 chr9 135009696 135009816 + 4.28099 NA Intergenic Intergenic -27578 NM_032536 84628 Hs.163642 NM_032536 HPRD:17650 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_8388 chr15 50451152 50451290 + 4.28099 NA Intergenic SVA_D|Other|Other -23172 NM_001159629 11001 Hs.11729 NM_003645 HPRD:11935 SLC27A2 ACSVL1|FACVL1|FATP2|HsT17226|VLACS|VLCS|hFACVL1 solute carrier family 27 (fatty acid transporter), member 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18850 chr4 37332498 37332815 + 4.28099 NA intron (NM_001144990, intron 2 of 6) intron (NM_001144990, intron 2 of 6) 85966 NM_001144990 57495 Hs.4280 NM_001144990 ENSG00000174145 NWD2 KIAA1239 NACHT and WD repeat domain containing 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_17522 chr3 89687495 89687706 + 4.28099 NA Intergenic (TTATA)n|Simple_repeat|Simple_repeat 530926 NM_182644 2042 Hs.123642 NM_005233 HPRD:01555 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27675 chrX 116912051 116912193 + 4.28099 NA Intergenic L1PA3|LINE|L1 195579 NM_033495 90293 Hs.348262 NM_033495 HPRD:06461 KLHL13 BKLHD2 kelch-like family member 13 protein-coding 21-PTNLD28-NN-CD8CAR_peak_15167 chr2 237331154 237331243 + 4.28099 NA intron (NM_001270585, intron 7 of 18) L1PA4|LINE|L1 81142 NM_001270585 79781 Hs.591594 NM_024726 HPRD:13743 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_22396 chr6 113928246 113928332 + 4.28099 NA Intergenic L1HS|LINE|L1 -250238 NM_002356 4082 Hs.519909 NM_002356 HPRD:07519 MARCKS 80K-L|MACS|PKCSL|PRKCSL myristoylated alanine-rich protein kinase C substrate protein-coding 21-PTNLD28-NN-CD8CAR_peak_20052 chr5 42292519 42292599 + 4.28099 NA Intergenic AluSx3|SINE|Alu -117112 NR_104636 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA 21-PTNLD28-NN-CD8CAR_peak_19726 chr4 186717727 186717962 + 4.28099 NA intron (NM_021069, intron 1 of 20) intron (NM_021069, intron 1 of 20) 14204 NM_001145672 8470 Hs.619806 NM_003603 HPRD:12473 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_20171 chr5 55334647 55334727 + 4.28099 NA Intergenic SVA_D|Other|Other 43692 NR_102755 441072 Hs.482141 NR_102755 ENSG00000227908 FLJ31104 - uncharacterized LOC441072 ncRNA 21-PTNLD28-NN-CD8CAR_peak_5416 chr11 117121880 117122049 + 4.28099 NA intron (NM_001077239, intron 6 of 14) SVA_D|Other|Other 18512 NM_001077239 257160 Hs.591934 NM_207343 HPRD:16815 RNF214 - ring finger protein 214 protein-coding 21-PTNLD28-NN-CD8CAR_peak_21260 chr6 1534456 1534628 + 4.27291 NA Intergenic Intergenic -71224 NR_125804 101927703 Hs.607964 NR_125804 FOXCUT LINC01379|TCONS_00011636 FOXC1 upstream transcript (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_26680 chr9 140674804 140674985 + 4.27107 NA intron (NM_001145527, intron 14 of 15) intron (NM_001145527, intron 14 of 15) 17420 NR_024341 643210 Hs.721002 NM_001039765 EHMT1-IT1 - EHMT1 intronic transcript 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_18488 chr3 195551279 195551663 + 4.25853 NA Intergenic Intergenic -12627 NM_018406 4585 Hs.369646 NM_004532 HPRD:11829 MUC4 ASGP|HSA276359|MUC-4 mucin 4, cell surface associated protein-coding 21-PTNLD28-NN-CD8CAR_peak_8119 chr15 20130613 20130746 + 4.25153 NA Intergenic Intergenic -357318 NR_038836 646096 Hs.448789 NR_038836 CHEK2P2 - checkpoint kinase 2 pseudogene 2 pseudo 21-PTNLD28-NN-CD8CAR_peak_8142 chr15 21315644 21315797 + 4.24290 NA Intergenic (GCTG)n|Simple_repeat|Simple_repeat 169953 NR_040094 348120 Hs.116287 NR_040094 ENSG00000258710 LINC01193 CT60 long intergenic non-protein coding RNA 1193 ncRNA 21-PTNLD28-NN-CD8CAR_peak_11411 chr18 34680760 34680908 + 4.23659 NA intron (NM_020776, intron 7 of 9) L1P1|LINE|L1 -271655 NM_015476 25941 Hs.436636 NM_015476 HPRD:12684 TPGS2 C18orf10|L17|PGs2 tubulin polyglutamylase complex subunit 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_12569 chr19 40482523 40482608 + 4.21253 NA intron (NM_006503, intron 6 of 10) AluY|SINE|Alu 5653 NM_006503 5704 Hs.211594 NM_006503 HPRD:04085 PSMC4 MIP224|RPT3|S6|TBP-7|TBP7 proteasome (prosome, macropain) 26S subunit, ATPase, 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27925 chrY 9930018 9930112 + 4.21253 NA Intergenic Intergenic 181658 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_26009 chr9 70387044 70387146 + 4.21201 NA Intergenic L2c|LINE|L2 -12171 NR_121570 101928381 Hs.708686 NR_121570 LOC101928381 - uncharacterized LOC101928381 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24349 chr8 1287141 1287262 + 4.21060 NA Intergenic Intergenic -36378 NR_111948 286083 Hs.382131 NR_033895 ENSG00000253640 LOC286083 - uncharacterized LOC286083 ncRNA 21-PTNLD28-NN-CD8CAR_peak_38 chr1 1082651 1082746 + 4.20251 NA Intergenic Intergenic 10301 NR_038869 254099 Hs.680488 NR_038869 ENSG00000223823 LINC01342 - long intergenic non-protein coding RNA 1342 ncRNA 21-PTNLD28-NN-CD8CAR_peak_2980 chr1 248469988 248470175 + 4.18392 NA Intergenic Intergenic -11201 NM_001004692 127064 Hs.553582 NM_001004692 HPRD:14951 OR2T12 OR1-57 olfactory receptor, family 2, subfamily T, member 12 protein-coding 21-PTNLD28-NN-CD8CAR_peak_7543 chr14 42895380 42895460 + 4.18392 NA Intergenic L1PA3|LINE|L1 818656 NM_152447 145581 Hs.136893 NM_152447 HPRD:17445 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 21-PTNLD28-NN-CD8CAR_peak_13013 chr19 55156383 55156509 + 4.18392 NA promoter-TSS (NR_107028) promoter-TSS (NR_107028) -314 NR_107028 102466251 NR_107028 MIR8061 hsa-mir-8061 microRNA 8061 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25982 chr9 69769892 69769994 + 4.15874 NA Intergenic L2c|LINE|L2 -12159 NR_121570 101928381 Hs.708686 NR_121570 LOC101928381 - uncharacterized LOC101928381 ncRNA 21-PTNLD28-NN-CD8CAR_peak_8776 chr15 102232552 102232821 + 4.15756 NA intron (NM_152334, intron 10 of 18) intron (NM_152334, intron 10 of 18) 31959 NM_152334 123283 Hs.657163 NM_152334 HPRD:15469 TARSL2 - threonyl-tRNA synthetase-like 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27460 chrX 61894815 61894967 + 4.15534 NA Intergenic ALR/Alpha|Satellite|centr 676327 NM_001012968 139886 Hs.612782 NM_001012968 HPRD:12556 SPIN4 - spindlin family, member 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_23498 chr7 76657688 76657810 + 4.13939 NA Intergenic Intergenic -11048 NR_028058 100132832 Hs.292996 NM_001129851 PMS2P9 PMS2L17|PMS2LP1|PMSR5 postmeiotic segregation increased 2 pseudogene 9 pseudo 21-PTNLD28-NN-CD8CAR_peak_8004 chr14 99456918 99456998 + 4.13266 NA Intergenic HERVH-int|LTR|ERV1 279008 NM_182560 283598 Hs.448754 NM_182560 HPRD:08075 C14orf177 - chromosome 14 open reading frame 177 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19071 chr4 58766334 58766555 + 4.13237 NA Intergenic L1PA3|LINE|L1 -789893 NM_001253835 3490 Hs.479808 NM_001553 HPRD:04183 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin-like growth factor binding protein 7 protein-coding 21-PTNLD28-NN-CD8CAR_peak_6039 chr12 47099097 47099266 + 4.13237 NA Intergenic L1PA2|LINE|L1 120599 NM_001143824 55089 Hs.446077 NM_018018 HPRD:12159 SLC38A4 ATA3|NAT3|PAAT solute carrier family 38, member 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11428 chr18 41941455 41941608 + 4.13237 NA intron (NR_110792, intron 2 of 4) (TA)n|Simple_repeat|Simple_repeat 170131 NR_110792 101927921 Hs.464986 NR_110792 ENSG00000267337 LINC01478 - long intergenic non-protein coding RNA 1478 ncRNA 21-PTNLD28-NN-CD8CAR_peak_11199 chr18 1632620 1632700 + 4.12315 NA Intergenic L1PA2|LINE|L1 -273030 NR_023926 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 21-PTNLD28-NN-CD8CAR_peak_9410 chr16 33345046 33345134 + 4.11730 NA Intergenic G-rich|Low_complexity|Low_complexity -46388 NR_033866 390705 Hs.278513 NR_033866 LOC390705 - protein phosphatase 2, regulatory subunit B'', beta pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_4535 chr11 30975711 30975833 + 4.08091 NA intron (NM_020869, intron 1 of 19) AluY|SINE|Alu 38461 NM_020869 100506627 Hs.530438 NM_020869 DCDC5 - doublecortin domain containing 5 protein-coding 21-PTNLD28-NN-CD8CAR_peak_1568 chr1 144825754 144825853 + 4.07411 NA intron (NM_001037675, intron 17 of 20) intron (NM_001037675, intron 17 of 20) 106562 NM_001002811 9659 Hs.584841 NM_014644 HPRD:10482 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding 21-PTNLD28-NN-CD8CAR_peak_20637 chr5 120391214 120391294 + 4.05521 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -266991 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA 21-PTNLD28-NN-CD8CAR_peak_907 chr1 52177654 52177748 + 4.03036 NA intron (NM_148906, intron 2 of 22) SVA_F|Other|Other -17785 NM_148904 114883 Hs.21938 NM_024586 HPRD:09479 OSBPL9 ORP-9|ORP9 oxysterol binding protein-like 9 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19776 chr4 190880020 190880136 + 4.01983 NA intron (NM_004477, intron 6 of 8) AmnSINE1|SINE|Deu 18104 NM_004477 2483 Hs.203772 NM_004477 HPRD:03176 FRG1 FRG1A|FSG1 FSHD region gene 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18952 chr4 49187594 49187697 + 4.00913 NA Intergenic Intergenic 198986 NM_001286791 80157 Hs.479703 NM_025087 HPRD:08638 CWH43 CWH43-C cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_27445 chrX 61767351 61767473 + 4.00304 NA Intergenic ALR/Alpha|Satellite|centr 803806 NM_001012968 139886 Hs.612782 NM_001012968 HPRD:12556 SPIN4 - spindlin family, member 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_23259 chr7 61771855 61771972 + 3.99562 NA Intergenic LTR49|LTR|ERV1 992521 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_225 chr1 13365296 13365408 + 3.98502 NA intron (NM_001013407, intron 2 of 3).2 intron (NM_001013407, intron 2 of 3).2 466 NM_001300891 101929983 NM_001300891 LOC101929983 - PRAME family member 9/15-like protein-coding 21-PTNLD28-NN-CD8CAR_peak_9359 chr16 32290941 32291103 + 3.98090 NA Intergenic Intergenic 10280 NR_033866 390705 Hs.278513 NR_033866 LOC390705 - protein phosphatase 2, regulatory subunit B'', beta pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_22531 chr6 141942540 141942727 + 3.98086 NA Intergenic L1PA2|LINE|L1 467303 NM_002511 4829 Hs.654478 NM_002511 HPRD:01211 NMBR BB1 neuromedin B receptor protein-coding 21-PTNLD28-NN-CD8CAR_peak_27185 chrX 16982833 16982959 + 3.95943 NA intron (NM_004726, intron 1 of 17) SVA_D|Other|Other 18082 NM_001080975 9185 Hs.186810 NM_004726 HPRD:02262 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27368 chrX 54994091 54994252 + 3.95619 NA intron (NM_002625, intron 1 of 13) L1PA3|LINE|L1 26340 NM_002625 5207 Hs.444304 NM_002625 HPRD:02411 PFKFB1 F6PK|HL2K|PFRX 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_23137 chr7 48242324 48242457 + 3.93172 NA intron (NM_152701, intron 3 of 61) LTR12C|LTR|ERV1 31333 NM_152701 154664 Hs.226568 NM_152701 HPRD:07422 ABCA13 - ATP-binding cassette, sub-family A (ABC1), member 13 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14040 chr2 92001857 92002000 + 3.92691 NA Intergenic MIRb|SINE|MIR 38560 NR_003503 645367 Hs.650223 NR_003503 GGT8P GGT1P1 gamma-glutamyltransferase 8 pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_7205 chr13 101966365 101966445 + 3.92356 NA intron (NM_052867, intron 7 of 43) L1PA4|LINE|L1 102408 NM_052867 259232 Hs.525146 NM_052867 HPRD:15647 NALCN CanIon|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding 21-PTNLD28-NN-CD8CAR_peak_25725 chr9 35392574 35392738 + 3.90699 NA intron (NM_006377, intron 25 of 38) L1PA3|LINE|L1 -14096 NR_003582 158381 Hs.575661 NR_003581 HPRD:18739 ATP8B5P FetA ATPase, class I, type 8B, member 5, pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_11596 chr18 73011591 73011910 + 3.88306 NA Intergenic Intergenic 89040 NM_005786 10194 Hs.284217 NM_005786 HPRD:15308 TSHZ1 CAA|NY-CO-33|SDCCAG33|TSH1 teashirt zinc finger homeobox 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26053 chr9 75455695 75455799 + 3.86552 NA Intergenic SVA_F|Other|Other 33278 NR_121180 101927258 Hs.586433 NR_121120 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25660 chr9 32529658 32529759 + 3.85877 NA Intergenic MER57E2|LTR|ERV1 -3386 NM_014314 23586 Hs.190622 NM_014314 HPRD:13131 DDX58 RIG-I|RIGI|RLR-1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 protein-coding 21-PTNLD28-NN-CD8CAR_peak_21313 chr6 4254908 4255086 + 3.85877 NA Intergenic CpG 118691 NR_103764 100507506 Hs.665936 NR_103764 ENSG00000234817 LOC100507506 - uncharacterized LOC100507506 ncRNA 21-PTNLD28-NN-CD8CAR_peak_15981 chr21 9487792 9487872 + 3.83437 NA Intergenic Intergenic -338000 NR_037421 100500862 NR_037421 MIR3648-1 MIR3648 microRNA 3648-1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_16061 chr21 10887717 10887797 + 3.82912 NA Intergenic L2|LINE|L2 103186 NM_001290224 7179 Hs.122986 NM_199259 HPRD:05064 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding 21-PTNLD28-NN-CD8CAR_peak_14081 chr2 92316236 92316346 + 3.82300 NA Intergenic ALR/Alpha|Satellite|centr 187132 NR_027714 440888 Hs.730239 NM_001032412 ENSG00000226481 ACTR3BP2 FKSG73 ACTR3B pseudogene 2 pseudo 21-PTNLD28-NN-CD8CAR_peak_11619 chr18 76560420 76560562 + 3.81097 NA Intergenic C-rich|Low_complexity|Low_complexity -179784 NM_171999 27164 Hs.700557 NM_171999 SALL3 ZNF796 spalt-like transcription factor 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_12494 chr19 37785082 37785252 + 3.80665 NA Intergenic SST1|Satellite|centr -25255 NR_029390 284412 Hs.635932 NR_029390 LOC284412 - uncharacterized LOC284412 ncRNA 21-PTNLD28-NN-CD8CAR_peak_20626 chr5 117877726 117878094 + 3.80099 NA intron (NR_104610, intron 1 of 9) intron (NR_104610, intron 1 of 9) 19902 NR_104610 101927280 Hs.543951 NR_104610 LOC101927280 - uncharacterized LOC101927280 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24238 chr7 154541167 154541299 + 3.79140 NA intron (NM_001290252, intron 6 of 23) GA-rich|Low_complexity|Low_complexity -178994 NR_024477 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1OS PAXIP1-AS2 PAXIP1 opposite strand ncRNA 21-PTNLD28-NN-CD8CAR_peak_1261 chr1 102484396 102484574 + 3.76391 NA Intergenic L1PA4|LINE|L1 -21695 NR_110211 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_21333 chr6 6261910 6262465 + 3.76391 NA intron (NM_000129, intron 4 of 14) intron (NM_000129, intron 4 of 14) 58737 NM_000129 2162 Hs.335513 NM_000129 HPRD:00604 F13A1 F13A coagulation factor XIII, A1 polypeptide protein-coding 21-PTNLD28-NN-CD8CAR_peak_18990 chr4 49336980 49337094 + 3.76007 NA Intergenic TAR1|Satellite|telo 348378 NM_001286791 80157 Hs.479703 NM_025087 HPRD:08638 CWH43 CWH43-C cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein-coding 21-PTNLD28-NN-CD8CAR_peak_20566 chr5 108677743 108677891 + 3.75549 NA intron (NM_014819, intron 9 of 9) SVA_F|Other|Other 67858 NM_014819 9867 Hs.483036 NM_014819 HPRD:11436 PJA2 Neurodap1|RNF131 praja ring finger 2, E3 ubiquitin protein ligase protein-coding 21-PTNLD28-NN-CD8CAR_peak_19936 chr5 17525423 17525584 + 3.75486 NA Intergenic Intergenic -138084 NR_033975 401177 Hs.508311 NR_033975 ENSG00000250822 LOC401177 - uncharacterized LOC401177 ncRNA 21-PTNLD28-NN-CD8CAR_peak_15464 chr20 30015400 30015480 + 3.74020 NA intron (NR_045677, intron 2 of 2) SVA_D|Other|Other 1543 NR_045677 245935 Hs.526624 NR_002577 ENSG00000204547 DEFB122 DEFB-22|DEFB122P defensin, beta 122 (pseudogene) pseudo 21-PTNLD28-NN-CD8CAR_peak_27520 chrX 71398687 71398768 + 3.69416 NA Intergenic SVA_E|Other|Other -2799 NM_001170747 5303 Hs.655623 NM_006223 HPRD:02219 PIN4 EPVH|PAR14|PAR17 protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) protein-coding 21-PTNLD28-NN-CD8CAR_peak_23444 chr7 75126974 75127091 + 3.65401 NA intron (NM_001099435, intron 2 of 7) intron (NM_001099435, intron 2 of 7) 2733 NM_001099435 442590 Hs.632298 NM_001099435 SPDYE5 - speedy/RINGO cell cycle regulator family member E5 protein-coding 21-PTNLD28-NN-CD8CAR_peak_1178 chr1 92033182 92033270 + 3.64884 NA Intergenic AluSx|SINE|Alu 66561 NM_001134420 8317 Hs.533573 NM_003503 HPRD:10345 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4029 chr10 104888794 104888874 + 3.64884 NA intron (NM_001134373, intron 3 of 17) SVA_F|Other|Other 64229 NM_012229 22978 Hs.97439 NM_012229 HPRD:02686 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding 21-PTNLD28-NN-CD8CAR_peak_6387 chr12 73789947 73790027 + 3.63682 NA Intergenic L1PA2|LINE|L1 237017 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LOC101928137 - uncharacterized LOC101928137 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25930 chr9 66995428 66995559 + 3.63179 NA Intergenic ALR/Alpha|Satellite|centr 36579 NR_046175 286297 Hs.645503 NR_046175 ENSG00000182021 LOC286297 - uncharacterized LOC286297 ncRNA 21-PTNLD28-NN-CD8CAR_peak_16831 chr22 47466538 47466761 + 3.62627 NA intron (NR_104292, intron 12 of 13) intron (NR_104292, intron 12 of 13) -154711 NR_122047 642757 Hs.632786 NR_122047 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24300 chr7 158460717 158461016 + 3.60918 NA intron (NM_001281933, intron 13 of 27) intron (NM_001281933, intron 13 of 27) 36656 NR_104054 54892 Hs.18616 NM_017760 HPRD:10539 NCAPG2 CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex, subunit G2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_12493 chr19 37782624 37782725 + 3.54284 NA Intergenic SST1|Satellite|centr -22762 NR_029390 284412 Hs.635932 NR_029390 LOC284412 - uncharacterized LOC284412 ncRNA 21-PTNLD28-NN-CD8CAR_peak_21259 chr6 1534060 1534154 + 3.53446 NA Intergenic Intergenic -71659 NR_125804 101927703 Hs.607964 NR_125804 FOXCUT LINC01379|TCONS_00011636 FOXC1 upstream transcript (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_4286 chr11 1078969 1079114 + 3.53446 NA intron (NM_002457, intron 6 of 49) intron (NM_002457, intron 6 of 49) 4166 NM_002457 4583 Hs.315 NM_002457 HPRD:11828 MUC2 MLP|MUC-2|SMUC mucin 2, oligomeric mucus/gel-forming protein-coding 21-PTNLD28-NN-CD8CAR_peak_19315 chr4 103539011 103539102 + 3.53446 NA TTS (NM_001165412) TTS (NM_001165412) 116570 NM_001165412 4790 Hs.618430 NM_003998 HPRD:01238 NFKB1 EBP-1|KBF1|NF-kB1|NF-kappa-B|NF-kappaB|NFKB-p105|NFKB-p50|NFkappaB|p105|p50 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_9226 chr16 29390651 29390731 + 3.52535 NA Intergenic L2b|LINE|L2 -69975 NR_002454 606724 Hs.744975 NR_002454 LOC606724 - coronin, actin binding protein, 1A pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_8616 chr15 78904472 78904646 + 3.51560 NA intron (NM_000743, intron 4 of 5) L1PA4|LINE|L1 9078 NM_001166694 1136 Hs.89605 NM_000743 HPRD:07511 CHRNA3 LNCR2|NACHRA3|PAOD2 cholinergic receptor, nicotinic, alpha 3 (neuronal) protein-coding 21-PTNLD28-NN-CD8CAR_peak_1376 chr1 114785106 114785186 + 3.51560 NA Intergenic SVA_A|Other|Other -88674 NM_001270805 148281 Hs.370963 NM_205848 HPRD:09654 SYT6 sytVI synaptotagmin VI protein-coding 21-PTNLD28-NN-CD8CAR_peak_12350 chr19 29955915 29956025 + 3.49573 NA intron (NR_040029, intron 1 of 9) L1PA2|LINE|L1 60689 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25282 chr8 129341172 129341393 + 3.49420 NA Intergenic Intergenic 178920 NR_031613 100302281 NR_031613 miRBase:MI0006341 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25197 chr8 121534421 121534544 + 3.47263 NA intron (NM_022045, intron 20 of 21) intron (NM_022045, intron 20 of 21) -76835 NM_014078 28998 Hs.333823 NM_014078 HPRD:14740 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding 21-PTNLD28-NN-CD8CAR_peak_8747 chr15 99036683 99036806 + 3.47263 NA intron (NM_182562, intron 2 of 6) SVA_D|Other|Other 20867 NM_182562 283777 Hs.668070 NM_182562 HPRD:08265 FAM169B - family with sequence similarity 169, member B protein-coding 21-PTNLD28-NN-CD8CAR_peak_15330 chr20 12567056 12567235 + 3.44003 NA Intergenic L1PA2|LINE|L1 350466 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24122 chr7 144185730 144185914 + 3.42977 NA intron (NM_022445, intron 8 of 8) (CA)n|Simple_repeat|Simple_repeat -78502 NM_001080413 135935 Hs.558628 NM_001080413 ENSG00000106410 NOBOX OG-2|OG2|OG2X|POF5|TCAG_12042 NOBOX oogenesis homeobox protein-coding 21-PTNLD28-NN-CD8CAR_peak_2800 chr1 230036741 230036821 + 3.42820 NA Intergenic Intergenic -156755 NM_001291866 2590 Hs.743964 NM_004481 HPRD:03782 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_27770 chrX 139493728 139493808 + 3.42820 NA Intergenic (TA)n|Simple_repeat|Simple_repeat 93457 NM_005634 6658 Hs.157429 NM_005634 HPRD:02432 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY (sex determining region Y)-box 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_5562 chr11 133674758 133674885 + 3.42820 NA intron (NR_120444, intron 2 of 2) AluY|SINE|Alu 5450 NR_120444 646522 Hs.560000 NR_120444 LOC646522 - uncharacterized LOC646522 ncRNA 21-PTNLD28-NN-CD8CAR_peak_15905 chr20 57708103 57708231 + 3.42820 NA Intergenic Intergenic -57908 NM_178457 128611 Hs.473204 NM_178457 ENSG00000124203 ZNF831 C20orf174|dJ492J12.1 zinc finger protein 831 protein-coding 21-PTNLD28-NN-CD8CAR_peak_18841 chr4 34513188 34513268 + 3.42820 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -1732510 NR_122079 439933 Hs.591071 NR_122079 ENSG00000247193 LOC439933 - uncharacterized LOC439933 ncRNA 21-PTNLD28-NN-CD8CAR_peak_18851 chr4 37332949 37333048 + 3.42820 NA intron (NM_001144990, intron 2 of 6) intron (NM_001144990, intron 2 of 6) 86308 NM_001144990 57495 Hs.4280 NM_001144990 ENSG00000174145 NWD2 KIAA1239 NACHT and WD repeat domain containing 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_11809 chr19 5984384 5984484 + 3.42820 NA intron (NR_046376, intron 1 of 3) AluSx1|SINE|Alu 6020 NR_046376 100128568 Hs.624525 NR_046376 ENSG00000266983 LOC100128568 - uncharacterized LOC100128568 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24481 chr8 19244624 19244734 + 3.42820 NA intron (NM_022071, intron 8 of 9) AluJo|SINE|Alu 73192 NM_001174159 63898 Hs.303208 NM_022071 HPRD:08340 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding 21-PTNLD28-NN-CD8CAR_peak_7565 chr14 47256001 47256138 + 3.42820 NA Intergenic L1PA4|LINE|L1 -135041 NM_080746 140801 Hs.308332 NM_080746 HPRD:11753 RPL10L RPL10_5_1358 ribosomal protein L10-like protein-coding 21-PTNLD28-NN-CD8CAR_peak_5838 chr12 17250674 17250822 + 3.42820 NA Intergenic Intergenic 109067 NR_036619 728622 Hs.741380 NR_036619 SKP1P2 SKP1B|p19B S-phase kinase-associated protein 1 pseudogene 2 pseudo 21-PTNLD28-NN-CD8CAR_peak_12379 chr19 33444470 33444550 + 3.42820 NA intron (NM_032816, intron 4 of 18) intron (NM_032816, intron 4 of 18) 18359 NM_032816 84902 Hs.599703 NM_032816 HPRD:08601 CEP89 CCDC123|CEP123 centrosomal protein 89kDa protein-coding 21-PTNLD28-NN-CD8CAR_peak_11202 chr18 1642960 1643080 + 3.42554 NA Intergenic L1PA4|LINE|L1 -283390 NR_023926 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 21-PTNLD28-NN-CD8CAR_peak_26752 chr9_gl000199_random 136836 136975 + 3.42367 NA NA ALR/Alpha|Satellite|centr NA NA 21-PTNLD28-NN-CD8CAR_peak_3010 chr10 1084948 1085055 + 3.41946 NA TTS (NM_004508) TTS (NM_004508) 10060 NM_004508 3422 Hs.283652 NM_004508 HPRD:07235 IDI1 IPP1|IPPI1 isopentenyl-diphosphate delta isomerase 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_12492 chr19 37779969 37780199 + 3.41763 NA Intergenic SST1|Satellite|centr -20172 NR_029390 284412 Hs.635932 NR_029390 LOC284412 - uncharacterized LOC284412 ncRNA 21-PTNLD28-NN-CD8CAR_peak_15044 chr2 219711021 219711101 + 3.40143 NA Intergenic SVA_F|Other|Other -13485 NM_006522 7475 Hs.29764 NM_006522 HPRD:05233 WNT6 - wingless-type MMTV integration site family, member 6 protein-coding 21-PTNLD28-NN-CD8CAR_peak_3259 chr10 26920869 26921024 + 3.39920 NA Intergenic L1PA5|LINE|L1 -11091 NR_026794 731789 Hs.178186 NR_026794 ENSG00000231976 LINC00202-2 - long intergenic non-protein coding RNA 202-2 ncRNA 21-PTNLD28-NN-CD8CAR_peak_25610 chr9 17764987 17765143 + 3.37885 NA intron (NM_003026, intron 3 of 8) intron (NM_003026, intron 3 of 8) 186113 NM_003026 6456 Hs.75149 NM_003026 HPRD:05125 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3-domain GRB2-like 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26133 chr9 90749182 90749265 + 3.36294 NA intron (NM_001166137, intron 1 of 3) intron (NM_001166137, intron 1 of 3) 677 NM_001166137 645961 Hs.632070 NM_001166137 SPATA31C2 FAM75C2 SPATA31 subfamily C, member 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_20874 chr5 141454932 141455012 + 3.35908 NA Intergenic SVA_F|Other|Other -33352 NM_030571 80762 Hs.9788 NM_030571 HPRD:14816 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_5482 chr11 123580105 123580185 + 3.33201 NA Intergenic AluSx|SINE|Alu 32218 NM_003455 7753 Hs.112556 NM_003455 HPRD:04577 ZNF202 ZKSCAN10|ZSCAN42 zinc finger protein 202 protein-coding 21-PTNLD28-NN-CD8CAR_peak_20472 chr5 91578481 91578606 + 3.30951 NA Intergenic L1PA5|LINE|L1 -899394 NM_020801 57561 Hs.24684 NM_020801 HPRD:09810 ARRDC3 TLIMP arrestin domain containing 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_21470 chr6 21364565 21364645 + 3.29406 NA Intergenic HERVH-int|LTR|ERV1 147518 NR_103790 100874531 Hs.112750 NR_103790 LINC00581 - long intergenic non-protein coding RNA 581 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24675 chr8 42128544 42128628 + 3.28636 NA promoter-TSS (NM_001190720) promoter-TSS (NM_001190720) -234 NM_001242778 3551 Hs.597664 NM_001556 HPRD:04462 IKBKB IKK-beta|IKK2|IKKB|IMD15|NFKBIKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta protein-coding 21-PTNLD28-NN-CD8CAR_peak_39 chr1 1120114 1120267 + 3.28636 NA intron (NM_153254, intron 8 of 8) intron (NM_153254, intron 8 of 8) 5113 NM_153254 254173 Hs.454835 NM_153254 HPRD:08771 TTLL10 TTLL5 tubulin tyrosine ligase-like family, member 10 protein-coding 21-PTNLD28-NN-CD8CAR_peak_26878 chrUn_gl000217 119186 119298 + 3.28520 NA NA MLT1A0|LTR|ERVL-MaLR NA NA 21-PTNLD28-NN-CD8CAR_peak_106 chr1 4137800 4138028 + 3.28076 NA Intergenic Intergenic 137242 NR_040065 728716 Hs.668359 NR_040065 LINC01346 - long intergenic non-protein coding RNA 1346 ncRNA 21-PTNLD28-NN-CD8CAR_peak_11899 chr19 10212713 10212835 + 3.27893 NA intron (NM_031917, intron 1 of 5) AluY|SINE|Alu 651 NM_031917 83854 Hs.712850 NM_031917 HPRD:12453 ANGPTL6 AGF|ARP5 angiopoietin-like 6 protein-coding 21-PTNLD28-NN-CD8CAR_peak_9463 chr16 34408778 34408900 + 3.26390 NA Intergenic Intergenic -4077 NR_002837 606551 Hs.646441 NR_002837 UBE2MP1 - ubiquitin-conjugating enzyme E2M pseudogene 1 pseudo 21-PTNLD28-NN-CD8CAR_peak_18729 chr4 9223410 9223502 + 3.23313 NA TTS (NM_001256853) TTS (NM_001256853) 1578 NM_001256862 100287478 Hs.741136 NM_001256862 ENSG00000249811 USP17L21 - ubiquitin specific peptidase 17-like family member 21 protein-coding 21-PTNLD28-NN-CD8CAR_peak_14047 chr2 92226838 92226955 + 3.22286 NA Intergenic Intergenic 97737 NR_027714 440888 Hs.730239 NM_001032412 ENSG00000226481 ACTR3BP2 FKSG73 ACTR3B pseudogene 2 pseudo 21-PTNLD28-NN-CD8CAR_peak_13238 chr2 3091766 3091880 + 3.20923 NA intron (NR_110228, intron 3 of 6) L1PA4|LINE|L1 37975 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA 21-PTNLD28-NN-CD8CAR_peak_17493 chr3 75887378 75887502 + 3.12822 NA Intergenic Intergenic -52706 NM_001290210 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 X17|ZNF838 zinc finger protein 717 protein-coding 21-PTNLD28-NN-CD8CAR_peak_12996 chr19 54633562 54633642 + 3.10714 NA intron (NM_015629, intron 13 of 13) intron (NM_015629, intron 13 of 13) -7834 NM_014516 4849 Hs.343571 NM_014516 HPRD:05368 CNOT3 LENG2|NOT3|NOT3H CCR4-NOT transcription complex, subunit 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16386 chr22 17026903 17027008 + 3.08443 NA Intergenic Intergenic 46745 NM_014406 150160 Hs.128342 NM_014406 HPRD:16708 CCT8L2 CESK1 chaperonin containing TCP1, subunit 8 (theta)-like 2 protein-coding 21-PTNLD28-NN-CD8CAR_peak_24203 chr7 151300301 151300426 + 3.04803 NA intron (NM_001040633, intron 5 of 15) CpG 28981 NM_024429 51422 Hs.647072 NM_016203 HPRD:04119 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding 21-PTNLD28-NN-CD8CAR_peak_24172 chr7 149941233 149941412 + 3.00014 NA Intergenic Intergenic 58747 NM_001164459 653857 Hs.664579 NM_001164458 ENSG00000106526 ACTR3C ARP11 ARP3 actin-related protein 3 homolog C (yeast) protein-coding 21-PTNLD28-NN-CD8CAR_peak_24973 chr8 86787969 86788118 + 2.98004 NA non-coding (NR_003594, exon 1 of 1).7 non-coding (NR_003594, exon 1 of 1).7 279 NR_003594 100288527 Hs.535056 NR_003594 REXO1L2P - REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 2 (pseudogene) pseudo 21-PTNLD28-NN-CD8CAR_peak_26612 chr9 138419947 138420156 + 2.86199 NA Intergenic Intergenic 6767 NM_001252619 3933 Hs.530311 NM_002297 HPRD:01059 LCN1 PMFA|TLC|TP|VEGP lipocalin 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19569 chr4 151884846 151884926 + 2.86199 NA intron (NM_006726, intron 2 of 57) SVA_B|Other|Other 51533 NM_001199282 987 Hs.480938 NM_006726 HPRD:07344 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS-responsive vesicle trafficking, beach and anchor containing protein-coding 21-PTNLD28-NN-CD8CAR_peak_11545 chr18 60472387 60472547 + 2.86199 NA intron (NM_194449, intron 1 of 16) (CATATA)n|Simple_repeat|Simple_repeat 89795 NM_194449 23239 Hs.465337 NM_194449 HPRD:15145 PHLPP1 PHLPP|PLEKHE1|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_22771 chr7 206617 206697 + 2.85938 NA intron (NM_020223, intron 2 of 9) CpG 13688 NM_020223 56975 Hs.134742 NM_020223 FAM20C DMP-4|DMP4|GEF-CK|RNS family with sequence similarity 20, member C protein-coding 21-PTNLD28-NN-CD8CAR_peak_11312 chr18 15227423 15227562 + 2.85242 NA Intergenic L1MEc|LINE|L1 98426 NR_027417 644669 Hs.579474 NR_027417 ENSG00000215512 LOC644669 - ankyrin repeat domain 30B pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_26814 chrUn_gl000216 2073 2284 + 2.84178 NA NA (CATTC)n|Satellite|Satellite NA NA 21-PTNLD28-NN-CD8CAR_peak_25468 chr8 144744255 144744464 + 2.80749 NA Intergenic Intergenic 12405 NM_014789 9831 Hs.43133 NM_014789 HPRD:18358 ZNF623 - zinc finger protein 623 protein-coding 21-PTNLD28-NN-CD8CAR_peak_24957 chr8 86567555 86567701 + 2.75673 NA non-coding (NR_003594, exon 1 of 1) non-coding (NR_003594, exon 1 of 1) 277 NR_003594 100288527 Hs.535056 NR_003594 REXO1L2P - REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 2 (pseudogene) pseudo 21-PTNLD28-NN-CD8CAR_peak_23556 chr7 90586471 90586610 + 2.74458 NA intron (NM_001287137, intron 7 of 12) L1PA3|LINE|L1 247410 NM_001287136 5218 Hs.258576 NM_012395 HPRD:15121 CDK14 PFTAIRE1|PFTK1 cyclin-dependent kinase 14 protein-coding 21-PTNLD28-NN-CD8CAR_peak_23242 chr7 61361137 61361284 + 2.74061 NA Intergenic L1MB3|LINE|L1 1403224 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 21-PTNLD28-NN-CD8CAR_peak_12925 chr19 51684176 51684279 + 2.66918 NA intron (NR_110732, intron 1 of 4) (TA)n|Simple_repeat|Simple_repeat 995 NR_110732 101928517 Hs.707693 NR_110732 ENSG00000269072 LOC101928517 - uncharacterized LOC101928517 ncRNA 21-PTNLD28-NN-CD8CAR_peak_27630 chrX 103151731 103151837 + 2.65833 NA intron (NR_031657, intron 1 of 1).2 L1PA2|LINE|L1 -64572 NM_016370 51209 Hs.522736 NM_016370 HPRD:02237 RAB9B RAB9L|Rab-9L RAB9B, member RAS oncogene family protein-coding 21-PTNLD28-NN-CD8CAR_peak_14900 chr2 202147268 202147419 + 2.65238 NA TTS (NM_033358) TTS (NM_033358) 22120 NM_033356 841 Hs.599762 NM_001228 HPRD:03459 CASP8 ALPS2B|CAP4|Casp-8|FLICE|MACH|MCH5 caspase 8, apoptosis-related cysteine peptidase protein-coding 21-PTNLD28-NN-CD8CAR_peak_25043 chr8 100572126 100572222 + 2.63482 NA intron (NM_152564, intron 31 of 61) L1PA5|LINE|L1 -23085 NR_030596 100126309 NR_030596 miRBase:MI0005541 MIR875 MIRN875|hsa-mir-875 microRNA 875 ncRNA 21-PTNLD28-NN-CD8CAR_peak_16252 chr21 41410868 41410981 + 2.63482 NA intron (NR_073202, intron 32 of 32) L1PA2|LINE|L1 171577 NM_006198 5121 Hs.80296 NM_006198 HPRD:03378 PCP4 PEP-19 Purkinje cell protein 4 protein-coding 21-PTNLD28-NN-CD8CAR_peak_862 chr1 47302029 47302109 + 2.63482 NA Intergenic L1PA4|LINE|L1 37399 NM_000779 1580 Hs.436317 NM_000779 HPRD:00491 CYP4B1 CYPIVB1|P-450HP cytochrome P450, family 4, subfamily B, polypeptide 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_4258 chr11 480280 480397 + 2.63482 NA intron (NM_030783, intron 4 of 11) intron (NM_030783, intron 4 of 11) 26483 NM_203383 6050 Hs.530687 NM_002939 HPRD:01412 RNH1 RAI|RNH ribonuclease/angiogenin inhibitor 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_1064 chr1 75367486 75367667 + 2.63482 NA Intergenic L1PA4|LINE|L1 -168484 NM_001889 1429 Hs.83114 NM_001889 HPRD:00437 CRYZ - crystallin, zeta (quinone reductase) protein-coding 21-PTNLD28-NN-CD8CAR_peak_7244 chr13 110035633 110035743 + 2.63482 NA Intergenic MIR|SINE|MIR -216037 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_19257 chr4 90561154 90561234 + 2.63482 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -196358 NR_045481 644248 Hs.553954 NR_045481 ENSG00000247775 SNCA-AS1 - SNCA antisense RNA 1 ncRNA 21-PTNLD28-NN-CD8CAR_peak_13132 chr19 58848878 58849113 + 2.63482 NA intron (NM_181846, intron 2 of 2) intron (NM_181846, intron 2 of 2) 2941 NR_106864 102465484 NR_106864 MIR6806 hsa-mir-6806 microRNA 6806 ncRNA 21-PTNLD28-NN-CD8CAR_peak_15912 chr20 60250593 60250702 + 2.63126 NA intron (NM_001252339, intron 1 of 14) intron (NM_001252339, intron 1 of 14) 75830 NM_001252339 1002 Hs.473231 NM_001794 HPRD:04304 CDH4 CAD4|R-CAD|RCAD cadherin 4, type 1, R-cadherin (retinal) protein-coding 21-PTNLD28-NN-CD8CAR_peak_4486 chr11 19882315 19882450 + 2.59569 NA intron (NM_182964, intron 3 of 37) SVA_D|Other|Other -100753 NR_039843 100616426 NR_039843 miRBase:MI0017327 MIR4694 - microRNA 4694 ncRNA 21-PTNLD28-NN-CD8CAR_peak_16492 chr22 21521336 21521463 + 2.55289 NA non-coding (NR_108107, exon 1 of 13) non-coding (NR_108107, exon 1 of 13) 207 NR_108107 642633 NM_201565 FAM230B - family with sequence similarity 230, member B (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_7153 chr13 92000796 92000900 + 2.48432 NA intron (NR_027349, intron 1 of 3) CpG 774 NR_027349 407975 Hs.24115 NR_027349 HPRD:12617 MIR17HG C13orf25|FGLDS2|LINC00048|MIHG1|MIRH1|MIRHG1|NCRNA00048|miR-17-92 miR-17-92 cluster host gene (non-protein coding) ncRNA 21-PTNLD28-NN-CD8CAR_peak_22022 chr6 44842297 44842436 + 2.44633 NA intron (NM_003599, intron 10 of 10) L1PA2|LINE|L1 323141 NR_030313 693171 NR_030313 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA 21-PTNLD28-NN-CD8CAR_peak_7281 chr13 113968858 113969080 + 2.39872 NA intron (NM_005561, intron 4 of 8) intron (NM_005561, intron 4 of 8) 17500 NM_005561 3916 Hs.494419 NM_005561 HPRD:01076 LAMP1 CD107a|LAMPA|LGP120 lysosomal-associated membrane protein 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_9932 chr16 88795661 88795753 + 2.30317 NA intron (NM_001142864, intron 22 of 50) intron (NM_001142864, intron 22 of 50) -1881 NR_103774 100289580 Hs.437712 NM_207451 LOC100289580 - uncharacterized LOC100289580 ncRNA 21-PTNLD28-NN-CD8CAR_peak_24990 chr8 89166443 89166564 + 2.28810 NA intron (NM_005941, intron 4 of 9) L1PA2|LINE|L1 173214 NM_005941 4325 Hs.492187 NM_005941 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 (membrane-inserted) protein-coding 21-PTNLD28-NN-CD8CAR_peak_7298 chr13 114774130 114774246 + 2.18132 NA intron (NM_007368, intron 17 of 23) CpG 123907 NM_007368 22821 Hs.593075 NM_007368 HPRD:05537 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding 21-PTNLD28-NN-CD8CAR_peak_16173 chr21 34693921 34694001 + 2.18130 NA Intergenic (CATA)n|Simple_repeat|Simple_repeat -3253 NM_000629 3454 Hs.529400 NM_000629 HPRD:00126 IFNAR1 AVP|IFN-alpha-REC|IFNAR|IFNBR|IFRC interferon (alpha, beta and omega) receptor 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_7876 chr14 77216381 77216486 + 2.10713 NA Intergenic SVA_D|Other|Other -11802 NM_014909 22846 Hs.525479 NM_014909 HPRD:12353 VASH1 KIAA1036 vasohibin 1 protein-coding 21-PTNLD28-NN-CD8CAR_peak_19322 chr4 103998011 103998091 + 2.08298 NA promoter-TSS (NM_178833) promoter-TSS (NM_178833) -121 NM_001300756 133308 Hs.546482 NM_178833 HPRD:14051 SLC9B2 NHA2|NHE10|NHEDC2 solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2 protein-coding