Information for motif10


Reverse Opposite:

p-value:1e-22
log p-value:-5.207e+01
Information Content per bp:1.722
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.65%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets23.3 +/- 11.5bp
Average Position of motif in Background30.6 +/- 1.8bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATTCTCARTCTK-----
NAGTTTCABTHTGACTNW

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATTCTCARTCTK---
ANTCCTTTGTCTNNNN

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATTCTCARTCTK
AGTATTCTCGGTTGC

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATTCTCARTCTK
NNAATTCTCGNTNAN

CHR/Cell-Cycle-Exp/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ATTCTCARTCTK
--TTTGAAACCG

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:ATTCTCARTCTK-
-----CTGTCTGG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:ATTCTCARTCTK-
-----TWGTCTGV

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ATTCTCARTCTK
ACCACTCTCGGTCAC

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ATTCTCARTCTK
ATTGTT------

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ATTCTCARTCTK
AGTTTCAGTTTC--