Information for motif14


Reverse Opposite:

p-value:1e-19
log p-value:-4.555e+01
Information Content per bp:1.603
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets21.7 +/- 13.2bp
Average Position of motif in Background18.1 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTWGATCY
NTATYGATCH

MA0027.1_En1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTWGATCY-
AAGTAGTGCCC

MA0130.1_ZNF354C/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTWGATCY
GTGGAT--

PH0016.1_Cux1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTWGATCY-----
ACCGGTTGATCACCTGA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTWGATCY---
-CTGTTCCTGG

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GTWGATCY---
NNTTTATTGTTCTNNN

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GTWGATCY---
AANTTATTGTTCTNNA

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTWGATCY-
---GCTCCG

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GTWGATCY----
AATCAATTGTTCCGCTA

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTWGATCY------
NNANTTGACCCCTNNNN