Information for motif20


Reverse Opposite:

p-value:1e-17
log p-value:-4.024e+01
Information Content per bp:1.501
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets25.4 +/- 13.8bp
Average Position of motif in Background27.7 +/- 8.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TGCACCTGGG---
NNTNCGCACCTGTNGAN

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TGCACCTGGG
NNCACCTGNN

MA0103.2_ZEB1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGCACCTGGG
CCTCACCTG--

MA0058.2_MAX/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGCACCTGGG
AAGCACATGG-

MA0147.2_Myc/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGCACCTGGG
AAGCACATGG-

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGCACCTGGG---
-TCCCCTGGGGAC

MA0522.1_Tcf3/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCACCTGGG
NTGCAGCTGTG

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TGCACCTGGG
----GCTGTG

MA0499.1_Myod1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCACCTGGG---
TGCAGCTGTCCCT

MA0464.1_Bhlhe40/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCACCTGGG
NTGCACGTGAG