Information for motif21


Reverse Opposite:

p-value:1e-17
log p-value:-4.024e+01
Information Content per bp:1.484
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets24.2 +/- 12.6bp
Average Position of motif in Background14.1 +/- 1.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GGACATNS
NACAGGAAAT--

MA0156.1_FEV/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGACATNS
CAGGAAAT--

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGACATNS-
AAGGATATNTN

MA0152.1_NFATC2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGACATNS
TGGAAAA--

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGACATNS
CCAGGAACAG--

MA0107.1_RELA/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGACATNS--
GGAAATTCCC

MA0136.1_ELF5/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGACATNS
AAGGAAGTA-

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGACATNS--
GGAAATTCCC

MA0515.1_Sox6/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGACATNS-
AAAACAATGG

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGACATNS
NACAGGAAAT--