Information for motif25


Reverse Opposite:

p-value:1e-16
log p-value:-3.765e+01
Information Content per bp:1.707
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.65%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets24.2 +/- 12.6bp
Average Position of motif in Background22.7 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TSCTGTTDTCAT--
GTNTTGTTGTGANNT

MA0480.1_Foxo1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TSCTGTTDTCAT
TCCTGTTTACA-

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TSCTGTTDTCAT
NNGTANTGTTTTNC-

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TSCTGTTDTCAT
ACATCCTGNT-----

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TSCTGTTDTCAT--
NNTTTTGTTTTGATNT

MA0157.1_FOXO3/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TSCTGTTDTCAT
---TGTTTACA-

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TSCTGTTDTCAT
--CTGTTTAC--

MA0488.1_JUN/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TSCTGTTDTCAT
AAGATGATGTCAT

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TSCTGTTDTCAT-
NNTCCTGCTGTGNNN

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TSCTGTTDTCAT-
TNTCCTGCTGTGNNG