Information for motif37


Reverse Opposite:

p-value:1e-13
log p-value:-3.017e+01
Information Content per bp:1.730
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets17.8 +/- 9.9bp
Average Position of motif in Background36.8 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0002.2_RUNX1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AGCCACAC--
AAACCACAGAN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AGCCACAC--
NWAACCACADNN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AGCCACAC-
AAACCACANN

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGCCACAC----
GGCCACACCCAN

MA0511.1_RUNX2/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AGCCACAC-----
CAAACCACAAACCCC

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGCCACAC---
-GCCACACCCA

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGCCACAC
NAAACCACAG

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGCCACAC-
AAACCACAGC

MA0493.1_Klf1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGCCACAC---
GGCCACACCCA

MA0479.1_FOXH1/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AGCCACAC
TCCAATCCACA-