Information for motif41


Reverse Opposite:

p-value:1e-11
log p-value:-2.533e+01
Information Content per bp:1.741
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.32%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets21.4 +/- 14.0bp
Average Position of motif in Background29.5 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0488.1_JUN/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATTACCTTAT---
ATGACATCATCNN

MA0029.1_Mecom/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATTACCTTAT---
TNTTATCTTATCTT

MA0109.1_Hltf/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ATTACCTTAT--
--AACCTTATAT

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATTACCTTAT----
NATGACATCATCNNN

PH0053.1_Hoxa6/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ATTACCTTAT
AAGGTAATTACCTAAT

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ATTACCTTAT----
----YCTTATCWVN

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATTACCTTAT---
---NCCTTATCTG

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATTACCTTAT---
---NNCTTATCTN

MA0482.1_Gata4/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ATTACCTTAT-----
----TCTTATCTCCC

MA0083.2_SRF/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATTACCTTAT---------
-TTNCCTTATTTGGNCATN