Information for motif42


Reverse Opposite:

p-value:1e-9
log p-value:-2.221e+01
Information Content per bp:1.675
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets28.2 +/- 11.6bp
Average Position of motif in Background38.9 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0090.1_TEAD1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTSSTMGGT
CACATTCCTCCG-

PB0074.1_Sox8_1/Jaspar

Match Rank:2
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ATTSSTMGGT-
GTATCTATTGTTCTTTA

MA0087.1_Sox5/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATTSSTMGGT
ATTGTTA---

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATTSSTMGGT-
AAAATTGTTATGAA

MA0077.1_SOX9/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATTSSTMGGT
CCATTGTTC---

MA0502.1_NFYB/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATTSSTMGGT--
CTGATTGGTCNATTT

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATTSSTMGGT
GCATTCCAGN--

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ATTSSTMGGT-
GGAAAAATTGTTAGGAA

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATTSSTMGGT
RCATTCCWGG--

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ATTSSTMGGT--
AATCAATTGTTCCGCTA