Information for motif7


Reverse Opposite:

p-value:1e-24
log p-value:-5.664e+01
Information Content per bp:1.812
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.82%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets28.5 +/- 12.5bp
Average Position of motif in Background23.0 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCATGGT--
CGTGGGTGGTCC

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCATGGT----
TGATTGGCTANN

MA0078.1_Sox17/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCATGGT-
CTCATTGTC

PB0070.1_Sox30_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCATGGT-----
ANNTCCATTGTTCNNN

MA0077.1_SOX9/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCATGGT--
-CCATTGTTC

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCATGGT---
-CCATTGTTNY

MA0060.2_NFYA/Jaspar

Match Rank:7
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TGCATGGT---
AGAGTGCTGATTGGTCCA

MA0502.1_NFYB/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCATGGT------
CTGATTGGTCNATTT

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TGCATGGT---
NTTNTATGAATGTGNNC

MA0515.1_Sox6/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCATGGT---
-CCATTGTTTT