Information for motif8


Reverse Opposite:

p-value:1e-24
log p-value:-5.535e+01
Information Content per bp:1.823
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets22.8 +/- 10.8bp
Average Position of motif in Background25.5 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AAATAGGG
CCAAAAATAG--

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AAATAGGG------
TGCGCATAGGGGAGGAG

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AAATAGGG
DCYAAAAATAGM-

MA0132.1_Pdx1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAATAGGG
AATTAG--

PH0039.1_Mnx1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAATAGGG---
GTACTAATTAGTGGCG

MA0083.2_SRF/Jaspar

Match Rank:6
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------AAATAGGG---
CATGCCCAAATAAGGCAA

MA0075.1_Prrx2/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAATAGGG
AATTA---

PB0106.1_Arid5a_2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAATAGGG-----
CATACAATACGAAATAA

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAATAGGG
TAATTAGN-

MA0497.1_MEF2C/Jaspar

Match Rank:10
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------AAATAGGG
ATGCTAAAAATAGAA