Information for motif9


Reverse Opposite:

p-value:1e-23
log p-value:-5.408e+01
Information Content per bp:1.870
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif5.98%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets26.7 +/- 11.0bp
Average Position of motif in Background23.8 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCGTC
NNCAGGTGNN

PB0047.1_Myf6_1/Jaspar

Match Rank:2
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------CAGGCGTC--
GAAGAACAGGTGTCCG

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CAGGCGTC-
-AGGTGTCA

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CAGGCGTC-----
GCGGAGGTGTCGCCTC

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCGTC-
GCAGCTGTNN

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAGGCGTC
CAGCTGTT

MA0103.2_ZEB1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAGGCGTC-
CAGGTGAGG

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CAGGCGTC-
ACAGCTGTTN

MA0521.1_Tcf12/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CAGGCGTC
NNGCAGCTGTT

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CAGGCGTC------
GGCGAGGGGTCAAGGGC