Information for motif11


Reverse Opposite:

p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.741
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif14.52%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif2.09%
Average Position of motif in Targets26.3 +/- 11.4bp
Average Position of motif in Background21.6 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTGGGTAT
GTGGAT--

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGTAT-
CSTGGGAAAD

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GTGGGTAT--
TGCGGAGTGGGACTGG

PB0167.1_Sox13_2/Jaspar

Match Rank:4
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------GTGGGTAT--
GTATTGGGTGGGTAATT

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTGGGTAT-
NGCGTGGGCGGR

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTGGGTAT
TGCGTGGGYG-

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTGGGTAT-
GGCGGGAARN

MA0472.1_EGR2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTGGGTAT---
GTGCGTGGGCGGGNG

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTGGGTAT
CWGGCGGGAA-

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTGGGTAT
NNHTGTGGTTWN