| p-value: | 1e-9 |
| log p-value: | -2.172e+01 |
| Information Content per bp: | 1.571 |
| Number of Target Sequences with motif | 10.0 |
| Percentage of Target Sequences with motif | 8.06% |
| Number of Background Sequences with motif | 1.9 |
| Percentage of Background Sequences with motif | 0.84% |
| Average Position of motif in Targets | 23.2 +/- 13.1bp |
| Average Position of motif in Background | 24.7 +/- 9.1bp |
| Strand Bias (log2 ratio + to - strand density) | -0.5 |
| Multiplicity (# of sites on avg that occur together) | 1.10 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
POL010.1_DCE_S_III/Jaspar
| Match Rank: | 1 |
| Score: | 0.64
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GAGCCATGGC
CAGCC----- |
|
|
|
MA0077.1_SOX9/Jaspar
| Match Rank: | 2 |
| Score: | 0.62
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GAGCCATGGC
GAACAATGG- |
|
|
|
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 3 |
| Score: | 0.60
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GAGCCATGGC----
TTGCCATGGCAACN |
|
|
|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 4 |
| Score: | 0.60
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GAGCCATGGC
GAACAATGGN |
|
|
|
POL013.1_MED-1/Jaspar
| Match Rank: | 5 |
| Score: | 0.58
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GAGCCATGGC
CGGAGC------ |
|
|
|
PB0099.1_Zfp691_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.57
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----GAGCCATGGC--
NNNNTGAGCACTGTNNG |
|
|
|
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 7 |
| Score: | 0.57
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GAGCCATGGC----
TTGCCATGGCAACC |
|
|
|
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
| Match Rank: | 8 |
| Score: | 0.56
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---GAGCCATGGC---
CGGTTGCCATGGCAAC |
|
|
|
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
| Match Rank: | 9 |
| Score: | 0.56
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GAGCCATGGC---
KGTTGCCATGGCAAC |
|
|
|
MA0161.1_NFIC/Jaspar
| Match Rank: | 10 |
| Score: | 0.55
| | Offset: | 5
| | Orientation: | forward strand |
| Alignment: | GAGCCATGGC-
-----TTGGCA |
|
|
|
