Information for motif14


Reverse Opposite:

p-value:1e-9
log p-value:-2.172e+01
Information Content per bp:1.826
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif8.06%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets32.1 +/- 12.9bp
Average Position of motif in Background25.3 +/- 7.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0111.1_Spz1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGTAATAG-
AGGGTAACAGC

PB0109.1_Bbx_2/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GGTAATAG----
TGATTGTTAACAGTTGG

PH0013.1_Cdx2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGTAATAG-----
AAAGGTAATAAAATTT

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGTAATAG
GTAAACAG

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGTAATAG
GKTAATGR

PH0012.1_Cdx1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTAATAG-----
TAAGGTAATAAAATTA

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGTAATAG
SCCTAGCAACAG

PH0046.1_Hoxa10/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGTAATAG------
TAGGTAATAAAATTCA

PH0024.1_Dlx5/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGTAATAG------
GGGGTAATTAGCTCTG

MA0063.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGTAATAG
-TTAATTG