Information for motif15


Reverse Opposite:

p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.623
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif9.68%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets30.0 +/- 11.3bp
Average Position of motif in Background11.8 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AAGGGCTG-
-AGGCCTNG

POL002.1_INR/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAGGGCTG-
-NNNANTGA

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:AAGGGCTG--
----GCTGTG

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AAGGGCTG
---NGCTN

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAGGGCTG-----
TATTATGGGATGGATAA

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAGGGCTG----
NNTNAGGGGCGGNNNN

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGGGCTG-
-AGGCCTAG

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAGGGCTG-----
NNTNNGGGGCGGNGNGN

MA0117.1_Mafb/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AAGGGCTG----
----GCTGACGC

MA0597.1_THAP1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAGGGCTG
TNNGGGCAG