Information for motif18


Reverse Opposite:

p-value:1e-8
log p-value:-1.851e+01
Information Content per bp:1.592
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif12.10%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif2.11%
Average Position of motif in Targets23.1 +/- 12.6bp
Average Position of motif in Background21.2 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGATAGG
ATGCCAGACN--

MA0130.1_ZNF354C/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCCAGATAGG
ATCCAC-----

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCCAGATAGG---
CAAATCCAGACATCACA

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCCAGATAGG
-CCAGACAG-

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCCAGATAGG-
-CCAGACRSVB

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCCAGATAGG----
AAGGCCAGATGGTCCGG

MA0479.1_FOXH1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCCAGATAGG
TCCAATCCACA----

MA0083.2_SRF/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TCCAGATAGG----
CATGCCCAAATAAGGCAA

MA0461.1_Atoh1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCCAGATAGG
--CAGATGGC

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCCAGATAGG--
--CAGATAAGGN