Information for motif21


Reverse Opposite:

p-value:1e-5
log p-value:-1.364e+01
Information Content per bp:1.794
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif8.87%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif1.67%
Average Position of motif in Targets23.6 +/- 10.0bp
Average Position of motif in Background35.2 +/- 4.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0090.1_Zbtb12_1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TCTCDAAM-----
NNGATCTAGAACCTNNN

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TCTCDAAM-
AGGTCTCTAACC

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TCTCDAAM--
AGTATTCTCGGTTGC

PH0065.1_Hoxc10/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCTCDAAM---
TAAAGTCGTAAAACGT

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCDAAM--
NNAATTCTCGNTNAN

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCTCDAAM----
TAAGGTCGTAAAATCCT

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCTCDAAM---
AAAGCTCGTAAAATTT

PH0047.1_Hoxa11/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCTCDAAM---
TAAAGTCGTAAAACAT

PH0066.1_Hoxc11/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TCTCDAAM---
TAAAGTCGTAAAATAG

PH0077.1_Hoxd12/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TCTCDAAM----
CAAGGTCGTAAAATCTT