Information for motif4


Reverse Opposite:

p-value:1e-17
log p-value:-4.139e+01
Information Content per bp:1.874
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif12.90%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets24.1 +/- 14.7bp
Average Position of motif in Background14.1 +/- 1.3bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCCTCARC
TCCCCA--

MA0081.1_SPIB/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCARC
TTCCTCT--

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCARC
AAACCACAGC

MA0002.2_RUNX1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCARC-
AAACCACAGAN

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCCTCARC
ACGTCA--

MA0598.1_EHF/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCCTCARC
CCTTCCTG---

MA0117.1_Mafb/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCCTCARC
NCGTCAGC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCCTCARC-
NWAACCACADNN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCCTCARC
AAACCACANN

MA0018.2_CREB1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCARC
TGACGTCA--