Information for motif5


Reverse Opposite:

p-value:1e-14
log p-value:-3.451e+01
Information Content per bp:1.723
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif11.29%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets21.3 +/- 13.7bp
Average Position of motif in Background21.8 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CACTGTTCCA--
--CTGTTCCTGG

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CACTGTTCCA
---TTTTCCA

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACTGTTCCA
NCCATTGTTC--

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACTGTTCCA
CNGTCCTCCC

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CACTGTTCCA-
-NATGTTGCAA

MA0515.1_Sox6/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CACTGTTCCA
CCATTGTTTT-

MA0442.1_SOX10/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CACTGTTCCA
CTTTGT----

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CACTGTTCCA-
ANNTCCATTGTTCNNN

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CACTGTTCCA--
--ATTTTCCATT

MA0007.2_AR/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CACTGTTCCA
GNACANNNTGTTCTT