Information for motif6


Reverse Opposite:

p-value:1e-14
log p-value:-3.361e+01
Information Content per bp:1.654
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif13.71%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets23.2 +/- 12.1bp
Average Position of motif in Background22.4 +/- 10.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0037.2_GATA3/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTATTMTTMKGT
----TCTTATCT

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTATTMTTMKGT
NCNTTTGTTATTTNN-

PB0096.1_Zfp187_1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTATTMTTMKGT--
TTATTAGTACATAN

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTATTMTTMKGT
NNTTTTTCTTATNT

MA0029.1_Mecom/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTATTMTTMKGT-
TNTTATCTTATCTT

MA0035.3_Gata1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TTATTMTTMKGT--
---TTCTTATCTGT

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTATTMTTMKGT
NNTNNCAATATTAG--

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTATTMTTMKGT-
NNAATTTTATTGGNTN

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TTATTMTTMKGT
TCTTTANTAATANN-

PB0064.1_Sox14_1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TTATTMTTMKGT
NNTAATTATAATTNNN-