Information for motif7


Reverse Opposite:

p-value:1e-13
log p-value:-3.118e+01
Information Content per bp:1.724
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif10.48%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets33.6 +/- 9.5bp
Average Position of motif in Background19.0 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0599.1_KLF5/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GGCGGGGCAG
GGGGNGGGGC--

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GGCGGGGCAG
AGGGGGCGGGGCTG

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGGGCAG
GGGGGCGGGGCC-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GGCGGGGCAG
DGGGYGKGGC--

MA0039.2_Klf4/Jaspar

Match Rank:5
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GGCGGGGCAG
TGGGTGGGGC--

MA0079.3_SP1/Jaspar

Match Rank:6
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGGGCAG
GGGGGCGGGGC--

MA0516.1_SP2/Jaspar

Match Rank:7
Score:0.75
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGGGCAG
GGGNGGGGGCGGGGC--

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGGGCAG-
NAGANTGGCGGGGNGNA

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGGGGCAG-
NNAGGGGCGGGGTNNA

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGCGGGGCAG
GGGGGGGG---