Information for motif8


Reverse Opposite:

p-value:1e-13
log p-value:-3.118e+01
Information Content per bp:1.787
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif10.48%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets27.4 +/- 14.9bp
Average Position of motif in Background26.0 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CTTCTAKT
GCTTCC---

MF0001.1_ETS_class/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTCTAKT
CTTCCGGT

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTTCTAKT-
ACTTCCGGTT

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTTCTAKT-
ACTTCCGGTN

MA0497.1_MEF2C/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTCTAKT--------
-TTCTATTTTTAGNNN

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTTCTAKT----
AGNGTTCTAATGANN

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTTCTAKT-----
---CTATTTTTGG

MA0475.1_FLI1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTTCTAKT
CCACTTCCTGT

ETS(ETS)/Promoter/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTTCTAKT-
ACTTCCGGTT

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTTCTAKT
ATTTTCCATT