Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 3885)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 3000)	% of Background Sequences with Motif
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-3027	-6.972e+03	0.0000	1173.0	30.19%	0.3	0.01%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-3027	-6.972e+03	0.0000	1173.0	30.19%	0.3	0.01%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e-1686	-3.884e+03	0.0000	1400.0	36.03%	30.2	1.04%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e-98	-2.276e+02	0.0000	74.0	1.90%	0.0	0.00%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e-31	-7.324e+01	0.0000	69.0	1.78%	8.7	0.30%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-29	-6.864e+01	0.0000	525.0	13.51%	233.0	8.07%
NRF1/Promoter/Homer	STGCGCATGCGC	1e-22	-5.194e+01	0.0000	25.0	0.64%	0.0	0.00%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e-20	-4.612e+01	0.0000	23.0	0.59%	0.0	0.00%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e-18	-4.299e+01	0.0000	228.0	5.87%	89.1	3.09%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-17	-4.120e+01	0.0000	98.0	2.52%	26.7	0.92%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-16	-3.914e+01	0.0000	46.0	1.18%	8.0	0.28%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-15	-3.580e+01	0.0000	95.0	2.44%	28.0	0.97%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-14	-3.417e+01	0.0000	82.0	2.11%	22.1	0.77%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-13	-3.155e+01	0.0000	47.0	1.21%	9.2	0.32%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-12	-2.897e+01	0.0000	63.0	1.62%	16.0	0.55%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-12	-2.849e+01	0.0000	112.0	2.88%	39.4	1.37%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e-12	-2.830e+01	0.0000	560.0	14.41%	309.3	10.71%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e-10	-2.368e+01	0.0000	250.0	6.43%	121.7	4.21%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e-10	-2.340e+01	0.0000	23.0	0.59%	3.4	0.12%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e-9	-2.230e+01	0.0000	14.0	0.36%	1.3	0.05%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-9	-2.089e+01	0.0000	66.0	1.70%	21.1	0.73%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-9	-2.083e+01	0.0000	376.0	9.68%	204.5	7.08%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-8	-1.995e+01	0.0000	13.0	0.33%	1.4	0.05%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-8	-1.966e+01	0.0000	138.0	3.55%	60.6	2.10%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-8	-1.848e+01	0.0000	83.0	2.14%	31.4	1.09%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-7	-1.770e+01	0.0000	167.0	4.30%	79.0	2.74%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-7	-1.767e+01	0.0000	12.0	0.31%	0.0	0.00%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-7	-1.759e+01	0.0000	58.0	1.49%	19.4	0.67%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-7	-1.688e+01	0.0000	75.0	1.93%	28.7	1.00%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-7	-1.683e+01	0.0000	90.0	2.32%	36.5	1.26%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e-6	-1.499e+01	0.0000	218.0	5.61%	114.6	3.97%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-6	-1.384e+01	0.0000	14.0	0.36%	2.6	0.09%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e-6	-1.384e+01	0.0000	14.0	0.36%	2.2	0.08%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-5	-1.336e+01	0.0000	10.0	0.26%	0.8	0.03%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-4	-1.134e+01	0.0001	9.0	0.23%	1.1	0.04%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e-4	-1.058e+01	0.0002	12.0	0.31%	2.9	0.10%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-4	-9.604e+00	0.0004	36.0	0.93%	13.7	0.47%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-4	-9.583e+00	0.0004	34.0	0.87%	13.0	0.45%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e-4	-9.394e+00	0.0005	14.0	0.36%	3.2	0.11%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-3	-9.166e+00	0.0006	85.0	2.19%	41.3	1.43%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-3	-8.438e+00	0.0013	180.0	4.63%	102.9	3.56%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-3	-8.367e+00	0.0014	98.0	2.52%	50.0	1.73%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-3	-8.270e+00	0.0015	101.0	2.60%	52.8	1.83%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-3	-7.992e+00	0.0019	64.0	1.65%	30.6	1.06%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e-3	-7.615e+00	0.0027	7.0	0.18%	0.0	0.00%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-3	-7.243e+00	0.0038	19.0	0.49%	6.3	0.22%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-3	-7.198e+00	0.0039	125.0	3.22%	69.7	2.41%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-3	-7.176e+00	0.0039	25.0	0.64%	9.2	0.32%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-3	-6.924e+00	0.0049	12.0	0.31%	3.8	0.13%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-2	-6.866e+00	0.0051	176.0	4.53%	103.1	3.57%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e-2	-6.815e+00	0.0053	94.0	2.42%	50.8	1.76%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-2	-6.474e+00	0.0073	69.0	1.78%	35.7	1.24%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e-2	-6.283e+00	0.0087	9.0	0.23%	2.7	0.09%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-2	-6.252e+00	0.0088	148.0	3.81%	86.3	2.99%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-2	-6.084e+00	0.0102	123.0	3.17%	70.5	2.44%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-2	-5.937e+00	0.0110	6.0	0.15%	0.7	0.02%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e-2	-5.937e+00	0.0110	6.0	0.15%	1.0	0.03%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e-2	-5.937e+00	0.0110	6.0	0.15%	1.3	0.04%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e-2	-5.937e+00	0.0110	6.0	0.15%	1.7	0.06%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-2	-5.801e+00	0.0124	34.0	0.87%	15.5	0.54%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e-2	-5.799e+00	0.0124	11.0	0.28%	3.7	0.13%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-2	-5.799e+00	0.0124	11.0	0.28%	3.5	0.12%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e-2	-5.747e+00	0.0125	131.0	3.37%	76.6	2.65%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-2	-5.702e+00	0.0128	83.0	2.14%	45.3	1.57%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e-2	-5.595e+00	0.0141	13.0	0.33%	4.3	0.15%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-2	-5.392e+00	0.0170	422.0	10.86%	277.8	9.62%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-2	-5.260e+00	0.0191	26.0	0.67%	11.7	0.40%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-2	-5.130e+00	0.0214	86.0	2.21%	48.1	1.67%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e-2	-5.014e+00	0.0237	22.0	0.57%	9.9	0.34%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e-2	-4.815e+00	0.0285	117.0	3.01%	69.8	2.42%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-2	-4.755e+00	0.0298	10.0	0.26%	3.2	0.11%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-2	-4.725e+00	0.0303	16.0	0.41%	6.6	0.23%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-2	-4.625e+00	0.0330	89.0	2.29%	51.8	1.79%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-1	-4.598e+00	0.0335	61.0	1.57%	33.3	1.15%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-1	-4.519e+00	0.0358	156.0	4.01%	96.5	3.34%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-1	-4.485e+00	0.0365	87.0	2.24%	50.9	1.76%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e-1	-4.405e+00	0.0376	5.0	0.13%	0.0	0.00%
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e-1	-4.405e+00	0.0376	5.0	0.13%	1.3	0.05%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-1	-4.405e+00	0.0376	5.0	0.13%	1.5	0.05%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e-1	-4.405e+00	0.0376	5.0	0.13%	1.1	0.04%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-1	-4.291e+00	0.0416	57.0	1.47%	31.6	1.09%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-1	-3.905e+00	0.0604	97.0	2.50%	58.2	2.02%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-1	-3.900e+00	0.0604	7.0	0.18%	3.0	0.10%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-1	-3.864e+00	0.0614	128.0	3.29%	79.9	2.77%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e-1	-3.781e+00	0.0660	35.0	0.90%	18.1	0.63%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-1	-3.773e+00	0.0660	92.0	2.37%	55.0	1.91%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-1	-3.550e+00	0.0812	23.0	0.59%	11.6	0.40%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-1	-3.241e+00	0.1094	72.0	1.85%	43.5	1.50%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-1	-3.154e+00	0.1180	49.0	1.26%	28.1	0.97%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-1	-3.123e+00	0.1204	55.0	1.42%	33.0	1.14%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e-1	-3.044e+00	0.1288	17.0	0.44%	8.1	0.28%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e-1	-3.041e+00	0.1288	4.0	0.10%	0.9	0.03%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e-1	-3.033e+00	0.1288	30.0	0.77%	16.7	0.58%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-1	-2.973e+00	0.1339	33.0	0.85%	18.5	0.64%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-1	-2.905e+00	0.1418	84.0	2.16%	53.0	1.83%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e-1	-2.865e+00	0.1446	28.0	0.72%	15.4	0.53%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-1	-2.865e+00	0.1446	28.0	0.72%	15.3	0.53%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-1	-2.818e+00	0.1499	120.0	3.09%	77.4	2.68%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-1	-2.522e+00	0.1995	104.0	2.68%	67.8	2.35%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-1	-2.520e+00	0.1995	16.0	0.41%	8.8	0.30%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-1	-2.444e+00	0.2115	155.0	3.99%	103.2	3.57%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-1	-2.428e+00	0.2128	54.0	1.39%	33.8	1.17%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-1	-2.314e+00	0.2362	100.0	2.57%	65.7	2.28%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-1	-2.308e+00	0.2362	55.0	1.42%	34.0	1.18%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e0	-2.266e+00	0.2429	31.0	0.80%	18.8	0.65%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e0	-2.232e+00	0.2490	17.0	0.44%	9.2	0.32%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-2.195e+00	0.2560	56.0	1.44%	35.7	1.24%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e0	-2.177e+00	0.2582	208.0	5.35%	142.5	4.93%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-2.153e+00	0.2621	212.0	5.46%	145.4	5.03%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e0	-2.151e+00	0.2621	66.0	1.70%	42.1	1.46%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-2.108e+00	0.2692	29.0	0.75%	17.0	0.59%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-2.105e+00	0.2692	32.0	0.82%	19.3	0.67%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-2.103e+00	0.2692	73.0	1.88%	47.6	1.65%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.996e+00	0.2931	5.0	0.13%	2.7	0.09%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-1.873e+00	0.3285	3.0	0.08%	0.3	0.01%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-1.862e+00	0.3296	127.0	3.27%	86.3	2.99%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.843e+00	0.3328	93.0	2.39%	62.7	2.17%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.810e+00	0.3411	16.0	0.41%	9.5	0.33%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-1.803e+00	0.3411	60.0	1.54%	39.2	1.36%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-1.773e+00	0.3483	44.0	1.13%	28.8	1.00%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.698e+00	0.3720	48.0	1.24%	31.3	1.09%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.511e+00	0.4415	6.0	0.15%	3.9	0.14%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.511e+00	0.4415	6.0	0.15%	3.6	0.12%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.461e+00	0.4604	34.0	0.87%	22.3	0.77%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.447e+00	0.4629	89.0	2.29%	61.1	2.11%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-1.435e+00	0.4649	15.0	0.39%	9.8	0.34%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-1.409e+00	0.4736	48.0	1.24%	32.1	1.11%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-1.261e+00	0.5447	202.0	5.20%	144.5	5.00%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.258e+00	0.5447	4.0	0.10%	2.8	0.10%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.248e+00	0.5447	129.0	3.32%	91.4	3.17%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-1.218e+00	0.5555	7.0	0.18%	4.1	0.14%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.180e+00	0.5728	69.0	1.78%	48.3	1.67%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.158e+00	0.5811	48.0	1.24%	33.8	1.17%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.123e+00	0.5969	24.0	0.62%	16.9	0.59%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-1.052e+00	0.6364	209.0	5.38%	151.8	5.26%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.035e+00	0.6427	50.0	1.29%	36.0	1.25%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-9.876e-01	0.6688	15.0	0.39%	10.3	0.36%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-9.712e-01	0.6701	5.0	0.13%	3.7	0.13%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-9.712e-01	0.6701	5.0	0.13%	3.6	0.12%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-9.614e-01	0.6718	44.0	1.13%	31.9	1.11%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-9.395e-01	0.6818	19.0	0.49%	13.7	0.47%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-8.851e-01	0.7149	269.0	6.92%	197.8	6.85%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-8.594e-01	0.7284	31.0	0.80%	22.1	0.77%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-8.306e-01	0.7445	54.0	1.39%	39.6	1.37%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-8.275e-01	0.7445	13.0	0.33%	9.8	0.34%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-7.959e-01	0.7602	6.0	0.15%	4.5	0.15%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-7.392e-01	0.7991	14.0	0.36%	10.6	0.37%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-6.744e-01	0.8468	7.0	0.18%	5.5	0.19%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-6.688e-01	0.8468	11.0	0.28%	8.7	0.30%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-6.616e-01	0.8468	70.0	1.80%	52.2	1.81%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-6.490e-01	0.8513	35.0	0.90%	26.3	0.91%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-6.399e-01	0.8535	51.0	1.31%	38.0	1.32%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-6.053e-01	0.8777	24.0	0.62%	18.9	0.66%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-5.996e-01	0.8777	159.0	4.09%	119.1	4.13%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-5.838e-01	0.8852	8.0	0.21%	6.1	0.21%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-5.530e-01	0.9071	21.0	0.54%	16.6	0.58%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-5.447e-01	0.9088	142.0	3.65%	107.2	3.71%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-5.313e-01	0.9153	38.0	0.98%	29.3	1.01%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e0	-5.080e-01	0.9309	22.0	0.57%	17.1	0.59%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-4.968e-01	0.9356	18.0	0.46%	14.2	0.49%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-4.753e-01	0.9499	178.0	4.58%	135.6	4.70%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e0	-4.721e-01	0.9499	44.0	1.13%	34.6	1.20%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-4.556e-01	0.9511	10.0	0.26%	8.7	0.30%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-4.556e-01	0.9511	10.0	0.26%	8.4	0.29%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-4.164e-01	0.9831	20.0	0.51%	16.4	0.57%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-3.776e-01	1.0000	39.0	1.00%	31.1	1.08%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-3.334e-01	1.0000	13.0	0.33%	11.6	0.40%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-3.319e-01	1.0000	32.0	0.82%	26.2	0.91%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-3.292e-01	1.0000	50.0	1.29%	40.9	1.42%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-3.014e-01	1.0000	1.0	0.03%	0.0	0.00%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-3.014e-01	1.0000	1.0	0.03%	0.7	0.02%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-3.014e-01	1.0000	1.0	0.03%	0.0	0.00%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-3.014e-01	1.0000	1.0	0.03%	0.0	0.00%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-2.877e-01	1.0000	2.0	0.05%	3.0	0.10%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-2.645e-01	1.0000	3.0	0.08%	3.9	0.13%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-2.405e-01	1.0000	11.0	0.28%	10.7	0.37%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-2.388e-01	1.0000	32.0	0.82%	27.5	0.95%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-2.281e-01	1.0000	70.0	1.80%	57.3	1.98%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-2.082e-01	1.0000	34.0	0.87%	29.1	1.01%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e0	-2.078e-01	1.0000	29.0	0.75%	25.8	0.89%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-2.034e-01	1.0000	6.0	0.15%	6.7	0.23%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.702e-01	1.0000	21.0	0.54%	19.1	0.66%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.357e-01	1.0000	18.0	0.46%	17.2	0.60%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.270e-01	1.0000	25.0	0.64%	23.6	0.82%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.114e-01	1.0000	74.0	1.90%	63.7	2.21%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.097e-01	1.0000	14.0	0.36%	14.5	0.50%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-1.097e-01	1.0000	14.0	0.36%	14.3	0.50%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-1.052e-01	1.0000	55.0	1.42%	48.8	1.69%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.018e-01	1.0000	4.0	0.10%	5.7	0.20%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-9.290e-02	1.0000	2.0	0.05%	3.6	0.12%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-7.234e-02	1.0000	82.0	2.11%	71.0	2.46%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-7.044e-02	1.0000	12.0	0.31%	13.6	0.47%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-6.759e-02	1.0000	28.0	0.72%	27.4	0.95%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-6.641e-02	1.0000	13.0	0.33%	14.9	0.51%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-6.330e-02	1.0000	29.0	0.75%	28.4	0.98%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-5.560e-02	1.0000	31.0	0.80%	30.1	1.04%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-5.487e-02	1.0000	82.0	2.11%	72.5	2.51%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-4.881e-02	1.0000	158.0	4.07%	133.5	4.62%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-3.922e-02	1.0000	11.0	0.28%	13.6	0.47%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-3.434e-02	1.0000	24.0	0.62%	25.4	0.88%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-3.162e-02	1.0000	40.0	1.03%	39.7	1.37%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-3.068e-02	1.0000	47.0	1.21%	45.1	1.56%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-3.000e-02	1.0000	154.0	3.96%	132.4	4.59%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-2.965e-02	1.0000	188.0	4.84%	159.6	5.53%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e0	-2.334e-02	1.0000	45.0	1.16%	44.7	1.55%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-2.058e-02	1.0000	24.0	0.62%	26.4	0.91%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e0	-1.633e-02	1.0000	76.0	1.96%	71.7	2.48%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-1.376e-02	1.0000	79.0	2.03%	74.3	2.57%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.060e-02	1.0000	36.0	0.93%	38.8	1.35%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-9.441e-03	1.0000	14.0	0.36%	18.5	0.64%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-9.075e-03	1.0000	61.0	1.57%	60.2	2.08%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-7.663e-03	1.0000	57.0	1.47%	57.2	1.98%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-5.346e-03	1.0000	56.0	1.44%	57.6	2.00%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-5.000e-03	1.0000	31.0	0.80%	35.4	1.22%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-4.402e-03	1.0000	19.0	0.49%	24.8	0.86%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-3.927e-03	1.0000	8.0	0.21%	13.5	0.47%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-2.953e-03	1.0000	147.0	3.78%	135.5	4.69%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-2.296e-03	1.0000	211.0	5.43%	188.2	6.52%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-1.811e-03	1.0000	127.0	3.27%	120.4	4.17%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.638e-03	1.0000	84.0	2.16%	84.2	2.92%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.222e-03	1.0000	6.0	0.15%	12.6	0.44%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.188e-03	1.0000	1.0	0.03%	5.1	0.18%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.066e-03	1.0000	52.0	1.34%	57.1	1.98%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-4.590e-04	1.0000	6.0	0.15%	13.9	0.48%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-4.180e-04	1.0000	70.0	1.80%	75.8	2.63%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-2.620e-04	1.0000	70.0	1.80%	76.5	2.65%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-2.180e-04	1.0000	234.0	6.02%	215.8	7.47%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-2.020e-04	1.0000	141.0	3.63%	138.3	4.79%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.860e-04	1.0000	12.0	0.31%	21.4	0.74%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.600e-04	1.0000	111.0	2.86%	113.9	3.95%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-1.580e-04	1.0000	48.0	1.24%	57.5	1.99%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-1.180e-04	1.0000	484.0	12.45%	418.4	14.49%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-1.150e-04	1.0000	131.0	3.37%	131.9	4.57%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.020e-04	1.0000	8.0	0.21%	17.7	0.61%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-7.400e-05	1.0000	360.0	9.26%	321.5	11.13%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-2.200e-05	1.0000	55.0	1.42%	67.3	2.33%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-8.000e-06	1.0000	101.0	2.60%	111.6	3.86%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-6.000e-06	1.0000	20.0	0.51%	34.1	1.18%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-5.000e-06	1.0000	267.0	6.87%	254.5	8.81%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.000e-06	1.0000	15.0	0.39%	30.0	1.04%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e0	-1.000e-06	1.0000	101.0	2.60%	115.6	4.00%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.000e-06	1.0000	100.0	2.57%	115.2	3.99%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-0.000e+00	1.0000	2.0	0.05%	14.4	0.50%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%