Information for motif10


Reverse Opposite:

p-value:1e-66
log p-value:-1.533e+02
Information Content per bp:1.928
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets26.8 +/- 11.6bp
Average Position of motif in Background33.6 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTGCCCC
NNACTTGCCTT

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCTTGCCCC------
NNCNTGACCCCGCTCT

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGCTTGCCCC-----
GGGTGTGCCCAAAAGG

MA0597.1_THAP1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGCTTGCCCC--
---CTGCCCGCA

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTGCCCC------
NNANTTGACCCCTNNNN

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCTTGCCCC------
NNNNTGACCCGGCGCG

MA0057.1_MZF1_5-13/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGCTTGCCCC---
---TTCCCCCTAC

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCTTGCCCC------
TGTCGTGACCCCTTAAT

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTGCCCC------
NNNNTTGACCCCTNNNN

NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGCTTGCCCC
GGGGATTCCCCC