| p-value: | 1e-60 |
| log p-value: | -1.402e+02 |
| Information Content per bp: | 1.690 |
| Number of Target Sequences with motif | 71.0 |
| Percentage of Target Sequences with motif | 1.83% |
| Number of Background Sequences with motif | 3.9 |
| Percentage of Background Sequences with motif | 0.14% |
| Average Position of motif in Targets | 23.8 +/- 12.1bp |
| Average Position of motif in Background | 19.3 +/- 10.6bp |
| Strand Bias (log2 ratio + to - strand density) | 0.5 |
| Multiplicity (# of sites on avg that occur together) | 1.02 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 1 |
| Score: | 0.69
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CCTGCAGGCCTG-
GTCATGCHTGRCTGS |
|
|
|
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 2 |
| Score: | 0.60
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCTGCAGGCCTG-
NGTCACGCTTGGCTGC |
|
|
|
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 3 |
| Score: | 0.58
| | Offset: | 5
| | Orientation: | forward strand |
| Alignment: | CCTGCAGGCCTG-
-----AGGCCTNG |
|
|
|
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer
| Match Rank: | 4 |
| Score: | 0.55
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CCTGCAGGCCTG
NNCACCTGNN------ |
|
|
|
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 5 |
| Score: | 0.55
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCTGCAGGCCTG
CCCCCTGCTGTG--- |
|
|
|
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
| Match Rank: | 6 |
| Score: | 0.54
| | Offset: | 5
| | Orientation: | forward strand |
| Alignment: | CCTGCAGGCCTG-
-----AGGCCTAG |
|
|
|
PB0206.1_Zic2_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.54
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCTGCAGGCCTG
TCNCCTGCTGNGNNN |
|
|
|
PB0205.1_Zic1_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.54
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCTGCAGGCCTG
TNTCCTGCTGTGNNG |
|
|
|
MA0014.2_PAX5/Jaspar
| Match Rank: | 9 |
| Score: | 0.52
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CCTGCAGGCCTG-----
GTCACGCTTGGCTGCNCNN |
|
|
|
MA0524.1_TFAP2C/Jaspar
| Match Rank: | 10 |
| Score: | 0.52
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCTGCAGGCCTG
TGCCCTGGGGCNANN |
|
|
|
