Information for motif13


Reverse Opposite:

p-value:1e-57
log p-value:-1.316e+02
Information Content per bp:1.569
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets25.7 +/- 13.1bp
Average Position of motif in Background22.6 +/- 3.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GTCACTCAAA
NCTGTCAATCAN-

MA0099.2_JUN::FOS/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GTCACTCAAA
-TGACTCA--

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GTCACTCAAA
AGCCACTCAAG

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GTCACTCAAA
GSCTGTCACTCA--

MA0122.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTCACTCAAA
NCCACTTAN-

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTCACTCAAA
ATGASTCATH

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTCACTCAAA
ATGACTCATC

MA0477.1_FOSL1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GTCACTCAAA
GGTGACTCATG

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTCACTCAAA
AASCACTCAA-

MA0490.1_JUNB/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTCACTCAAA
GGATGACTCAT-