Information for motif20


Reverse Opposite:

p-value:1e-44
log p-value:-1.019e+02
Information Content per bp:1.746
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets27.1 +/- 13.3bp
Average Position of motif in Background20.7 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCTCTCCAGT
ATTTTCCATT

MA0463.1_Bcl6/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTCCAGT---
NGCTTTCTAGGAAN

MA0152.1_NFATC2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCTCTCCAGT
-TTTTCCA--

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCTCTCCAGT---
NNNCTTTCCAGGAAA

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCTCTCCAGT
AGCCACTCAAG-

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------TCTCTCCAGT--
TTTTTTTTTTTTTTCAGGTT

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------TCTCTCCAGT--
TTTTTTTTTTTTTTCAGGTT

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCTCTCCAGT-
-ATTTCCTGTN

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTCCAGT------
NANTTTCAAGTGGTTAN

PB0006.1_Bcl6b_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCTCTCCAGT------
TCTTTCGAGGAATTTG