Information for motif22


Reverse Opposite:

p-value:1e-37
log p-value:-8.742e+01
Information Content per bp:1.468
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets25.0 +/- 13.5bp
Average Position of motif in Background18.6 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GGGAAGGNAAGT--
---AAGGCAAGTGT

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGGAAGGNAAGT--
---CAGGTAAGTAT

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGAAGGNAAGT
AGAAACGAAAGT

MA0598.1_EHF/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAGGNAAGT
CAGGAAGG-----

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGAAGGNAAGT
GGGAATTGTAGT

MA0149.1_EWSR1-FLI1/Jaspar

Match Rank:6
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------GGGAAGGNAAGT
GGAAGGAAGGAAGGAAGG-

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAGGNAAGT
CSTGGGAAAD-----

MA0474.1_Erg/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGGAAGGNAAGT
ACAGGAAGTGG---

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGGAAGGNAAGT
-NGAAGC-----

MA0597.1_THAP1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAGGNAAGT
TNNGGGCAG------