Information for motif28


Reverse Opposite:

p-value:1e-26
log p-value:-6.096e+01
Information Content per bp:1.539
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets24.0 +/- 8.3bp
Average Position of motif in Background26.6 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0135.1_Lhx3/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TTTTAMWTBAAYTMATTTAW
-----GATTAATTAATTT--

PH0019.1_Dbx2/Jaspar

Match Rank:2
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:TTTTAMWTBAAYTMATTTAW----
--------NAATTAATTAATTNNN

PH0149.1_Pou3f4/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTTTAMWTBAAYTMATTTAW-
----GANTTAATTAATTAANN

MA0132.1_Pdx1/Jaspar

Match Rank:4
Score:0.56
Offset:11
Orientation:forward strand
Alignment:TTTTAMWTBAAYTMATTTAW
-----------CTAATT---

PH0146.1_Pou3f1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTTTAMWTBAAYTMATTTAW-
----NANTTAATTAATTANNN

MA0075.1_Prrx2/Jaspar

Match Rank:6
Score:0.56
Offset:12
Orientation:reverse strand
Alignment:TTTTAMWTBAAYTMATTTAW
------------TAATT---

PH0142.1_Pou1f1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTTTAMWTBAAYTMATTTAW-
----GANTTAATTAATTANNN

PB0028.1_Hbp1_1/Jaspar

Match Rank:8
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TTTTAMWTBAAYTMATTTAW---
-------NNCATTCATTCATNNN

PH0132.1_Pax6/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TTTTAMWTBAAYTMATTTAW--
------GNNAATTAATTAATCA

PH0093.1_Lhx3/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTTTAMWTBAAYTMATTTAW
--NNTATTTAATTAATTNN-