Information for motif29


Reverse Opposite:

p-value:1e-25
log p-value:-5.765e+01
Information Content per bp:1.657
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets24.6 +/- 10.2bp
Average Position of motif in Background26.8 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0103.2_ZEB1/Jaspar

Match Rank:1
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:ACCCAGGTGA--
---CAGGTGAGG

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:ACCCAGGTGA-
-NNCAGGTGNN

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ACCCAGGTGA-----
ATCCACAGGTGCGAAAA

NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACCCAGGTGA-
-KCCACGTGAC

MA0093.2_USF1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACCCAGGTGA--
-GCCACGTGACC

MA0154.2_EBF1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACCCAGGTGA-
TCCCTGGGGAN

MA0526.1_USF2/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACCCAGGTGA--
-GTCATGTGACC

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACCCAGGTGA-
-ACCACGTGAC

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACCCAGGTGA
NAHCAGCTGD

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACCCAGGTGA--
--TCACGTGACC