Information for motif30


Reverse Opposite:

p-value:1e-21
log p-value:-5.010e+01
Information Content per bp:1.836
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets28.2 +/- 13.3bp
Average Position of motif in Background22.1 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CGATTTCT---
KCTATTTTTRGH

MA0497.1_MEF2C/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CGATTTCT-----
TTCTATTTTTAGNNN

MA0052.2_MEF2A/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CGATTTCT----
NNGCTATTTTTAGCN

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGATTTCT--
CTATTTTTGG

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CGATTTCT----
TNNNATGATTTCNNCNN

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CGATTTCT-----
NNNCTGATATCTCNNNN

MF0008.1_MADS_class/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGATTTCT--
CCATATATGG

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGATTTCT----
--ATTTCCTGTN

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------CGATTTCT--
TNCNNAACAATTTTTNC

MA0156.1_FEV/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGATTTCT--
--ATTTCCTG