Information for motif31


Reverse Opposite:

p-value:1e-20
log p-value:-4.764e+01
Information Content per bp:1.530
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets23.6 +/- 12.7bp
Average Position of motif in Background24.9 +/- 10.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----TAGCGCCG----
NNNNTTGGCGCCGANNN

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----TAGCGCCG----
NNNNTTGGCGCCGANNN

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TAGCGCCG
--GCTCCG

PB0127.1_Gata6_2/Jaspar

Match Rank:4
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------TAGCGCCG--
GCGGCGATATCGCAGCG

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TAGCGCCG
DTTTCCCGCC-

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TAGCGCCG
CAGCC---

MA0024.2_E2F1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TAGCGCCG-
CCTCCCGCCCN

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TAGCGCCG--
CCGCATAGCAACGGA

PB0179.1_Sp100_2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TAGCGCCG--
NNTTTANNCGACGNA

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TAGCGCCG
AGCGCGCC-