Information for motif32


Reverse Opposite:

p-value:1e-20
log p-value:-4.732e+01
Information Content per bp:1.757
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets24.7 +/- 11.2bp
Average Position of motif in Background27.3 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTCRASTA-
-BCMATTAG

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTCRASTA
GGTAAGTA

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTCRASTA--
--YCATTAMC

MA0075.1_Prrx2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTCRASTA
---AATTA

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTCRASTA--------
TTCNAAGTACTTNNNNN

PB0135.1_Hoxa3_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTCRASTA---
AAAAACCATTAAGG

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTCRASTA----
AAAAACCAATTAAGAA

MA0125.1_Nobox/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTCRASTA
ACCAATTA

PH0041.1_Hmx1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTCRASTA------
ACAAGCAATTAATGAAT

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTCRASTA
TAATCAATTA