Information for motif34


Reverse Opposite:

p-value:1e-18
log p-value:-4.284e+01
Information Content per bp:1.584
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets24.1 +/- 11.9bp
Average Position of motif in Background24.2 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TGCWGCWGSAGM-
NNNNAGCAGCTGCTGAN

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGCWGCWGSAGM
-NCAGCTGCTG-

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGCWGCWGSAGM
ANCAGCTG----

MA0522.1_Tcf3/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGCWGCWGSAGM
NTGCAGCTGTG--

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCWGCWGSAGM
AGCAGCTGCTNN

MA0500.1_Myog/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGCWGCWGSAGM
GACAGCTGCAG-

MA0048.1_NHLH1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGCWGCWGSAGM
NCGCAGCTGCGN-

MA0521.1_Tcf12/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGCWGCWGSAGM
AACAGCTGCAG-

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCWGCWGSAGM
-GCAGCTGTNN-

MA0499.1_Myod1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCWGCWGSAGM
NGNGACAGCTGCN--