Information for motif35


Reverse Opposite:

p-value:1e-18
log p-value:-4.284e+01
Information Content per bp:1.954
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets22.6 +/- 11.1bp
Average Position of motif in Background28.3 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GTGGTGTG----
GTGGCGTGACNG

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GTGGTGTG--
ATGGGGTGAT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTGTG
NNHTGTGGTTWN

MA0511.1_RUNX2/Jaspar

Match Rank:4
Score:0.73
Offset:-7
Orientation:forward strand
Alignment:-------GTGGTGTG
GGGGTTTGTGGTTTG

MA0595.1_SREBF1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTGGTGTG--
GTGGGGTGAT

MA0596.1_SREBF2/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTGGTGTG--
ATGGGGTGAT

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTGTG
CTGTGGTTTN

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GTGGTGTG
GCTGTGGTTT-

MA0130.1_ZNF354C/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTGGTGTG
GTGGAT--

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTGTG
NNTGTGGTTT-