Information for motif36


Reverse Opposite:

p-value:1e-15
log p-value:-3.589e+01
Information Content per bp:1.640
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets24.1 +/- 9.3bp
Average Position of motif in Background31.1 +/- 8.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CGGCAAGGGGATGGGGCAAG
------GGGGGCGGGGC---

MA0516.1_SP2/Jaspar

Match Rank:2
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CGGCAAGGGGATGGGGCAAG
--GGGNGGGGGCGGGGC---

PB0107.1_Ascl2_2/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CGGCAAGGGGATGGGGCAAG
----NATNGGGNGGGGANAN

PB0097.1_Zfp281_1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGGCAAGGGGATGGGGCAAG
---GGGGGGGGGGGGGGA--

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGGCAAGGGGATGGGGCAAG
-NNNAAGGGGGCGGGNNN--

MA0599.1_KLF5/Jaspar

Match Rank:6
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CGGCAAGGGGATGGGGCAAG
-------GGGGNGGGGC---

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CGGCAAGGGGATGGGGCAAG
--------GGGGGGGG----

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CGGCAAGGGGATGGGGCAAG
------GGGGGCGGGGCC--

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CGGCAAGGGGATGGGGCAAG
----TAGGGCAAAGGTCA--

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CGGCAAGGGGATGGGGCAAG
---GTAGGGCAAAGGTCA--