Information for motif4


Reverse Opposite:

p-value:1e-125
log p-value:-2.892e+02
Information Content per bp:1.751
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif3.04%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets24.9 +/- 11.4bp
Average Position of motif in Background23.3 +/- 7.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGAATGACATG---
TNGAATTTCATTNAN

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGGAATGACATG
---CATGAC---

MA0058.2_MAX/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGGAATGACATG-
---AAGCACATGG

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGAATGACATG------
-ANTATTACATGTANNNN

PH0084.1_Irx3_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGAATGACATG------
-NNTATTACATGTANNNT

MA0488.1_JUN/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGGAATGACATG-----
----ATGACATCATCNN

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGGAATGACATG-----
-GTATTGACAGGTNNTT

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGAATGACATG
NTGATTGACAGN

PH0085.1_Irx4/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGAATGACATG------
-NNTTTTACATGTANNNT

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGAATGACATG-----
-GGATTGACAGGTCNTT