Information for motif5


Reverse Opposite:

p-value:1e-121
log p-value:-2.795e+02
Information Content per bp:1.528
Number of Target Sequences with motif197.0
Percentage of Target Sequences with motif5.07%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets27.2 +/- 13.3bp
Average Position of motif in Background29.0 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:MACAYGYTTG
--CACGCA--

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:MACAYGYTTG
-GCACGTNC-

PH0086.1_Irx5/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----MACAYGYTTG--
ANTNNTACATGTANNTN

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----MACAYGYTTG--
ANTATTACATGTANNNN

PH0085.1_Irx4/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----MACAYGYTTG--
NNTTTTACATGTANNNT

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:MACAYGYTTG-
-GCACGTACCC

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----MACAYGYTTG--
ANTNTTACATGTATNTA

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----MACAYGYTTG--
NNTATTACATGTANNNT

MA0004.1_Arnt/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:MACAYGYTTG
--CACGTG--

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-MACAYGYTTG
TGACACCT---