Information for motif6


Reverse Opposite:

p-value:1e-93
log p-value:-2.152e+02
Information Content per bp:1.596
Number of Target Sequences with motif126.0
Percentage of Target Sequences with motif3.24%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets25.4 +/- 12.4bp
Average Position of motif in Background28.3 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCCAGACTTGTC-
CAAATCCAGACATCACA

MA0525.1_TP63/Jaspar

Match Rank:2
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TCCAGACTTGTC-
AGACATGCCCAGACATGCCC

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGACTTGTC
ATGCCAGACN----

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCCAGACTTGTC
-CCAGACRSVB-

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCCAGACTTGTC
-BCAGACWA---

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCCAGACTTGTC
-CCAGACAG---

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCCAGACTTGTC--
---NNACTTGCCTT

MA0106.2_TP53/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TCCAGACTTGTC
ACATGCCCAGACATG--

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCCAGACTTGTC-----
---AAAATTGTTATGAA

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TCCAGACTTGTC--
AACATGCCCAGACATGCCCN