Information for motif1


Reverse Opposite:

p-value:1e-2054
log p-value:-4.730e+03
Information Content per bp:1.599
Number of Target Sequences with motif1452.0
Percentage of Target Sequences with motif30.81%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets25.0 +/- 10.6bp
Average Position of motif in Background32.5 +/- 9.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--GYCNGGACATGY
ATGCCCGGGCATGT

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:2
Score:0.83
Offset:-5
Orientation:forward strand
Alignment:-----GYCNGGACATGY---
AACATGCCCAGACATGCCCN

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:3
Score:0.83
Offset:-5
Orientation:forward strand
Alignment:-----GYCNGGACATGY---
AACATGCCCAGACATGCCCN

MA0106.2_TP53/Jaspar

Match Rank:4
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---GYCNGGACATGY
CATGTCTGGGCATGT

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:5
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----GYCNGGACATGY---
NGCATGTCNNGACATGCNNN

MA0525.1_TP63/Jaspar

Match Rank:6
Score:0.77
Offset:-6
Orientation:reverse strand
Alignment:------GYCNGGACATGY--
NGGCATGTCTGGGCATGTNN

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GYCNGGACATGY------
-AATATACATGTAAAATT

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GYCNGGACATGY------
-TAAATACATGTAAAATT

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GYCNGGACATGY------
-AAAATACATGTAATACT

PH0085.1_Irx4/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GYCNGGACATGY------
-AATATACATGTAAAACA