Information for motif11


Reverse Opposite:

p-value:1e-52
log p-value:-1.215e+02
Information Content per bp:1.706
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets28.1 +/- 12.0bp
Average Position of motif in Background24.2 +/- 9.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0048.1_NHLH1/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CGTCAGCTGCGS
GCGCAGCTGCGT

MA0500.1_Myog/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CGTCAGCTGCGS
-GACAGCTGCAG

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CGTCAGCTGCGS
CAGCAGCTGN--

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:CGTCAGCTGCGS
--HCAGCTGDTN

MA0521.1_Tcf12/Jaspar

Match Rank:5
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CGTCAGCTGCGS
-AACAGCTGCAG

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CGTCAGCTGCGS---
CTCAGCAGCTGCTACTG

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CGTCAGCTGCGS
NNACAGCTGC--

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:CGTCAGCTGCGS
---CAGCTGNT-

MA0522.1_Tcf3/Jaspar

Match Rank:9
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CGTCAGCTGCGS
-CACAGCTGCAG

MA0499.1_Myod1/Jaspar

Match Rank:10
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CGTCAGCTGCGS
NGNGACAGCTGCN-