Information for motif12


Reverse Opposite:

p-value:1e-49
log p-value:-1.138e+02
Information Content per bp:1.729
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets25.2 +/- 12.7bp
Average Position of motif in Background19.7 +/- 1.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AGTGGGCGAG
NGCGTGGGCGGR

MA0472.1_EGR2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGGCGAG--
GTGCGTGGGCGGGNG

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGGCGAG---
NNNAAGGGGGCGGGNNN

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGTGGGCGAG
TGCGTGGGYG--

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGTGGGCGAG--
--DGGGYGKGGC

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGTGGGCGAG--
--TGGGTGGGGC

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGTGGGCGAG-----
NNAGGGGCGGGGTNNA

MA0599.1_KLF5/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGTGGGCGAG--
--GGGGNGGGGC

MA0493.1_Klf1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGTGGGCGAG---
--TGGGTGTGGCN

MA0597.1_THAP1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGTGGGCGAG
TNNGGGCAG-