Information for motif19


Reverse Opposite:

p-value:1e-28
log p-value:-6.482e+01
Information Content per bp:1.790
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets25.4 +/- 13.8bp
Average Position of motif in Background19.8 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CGCTTTCG--
TGGTTTCAGT

MA0051.1_IRF2/Jaspar

Match Rank:2
Score:0.69
Offset:-10
Orientation:reverse strand
Alignment:----------CGCTTTCG
GTTTTGCTTTCACTTTCC

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGCTTTCG-----
TNTGGTTTCGATACN

PB0036.1_Irf6_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CGCTTTCG-----
NNNTTGGTTTCGNTNNN

MA0062.2_GABPA/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGCTTTCG-
NCCACTTCCGG

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTTCG------
NTGGTTTCGGTTNNN

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTTTCG
RSTTTCRSTTTC-

MA0076.2_ELK4/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGCTTTCG--
CCACTTCCGGC

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CGCTTTCG
AGTTTCAGTTTC-

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTTTCG
ACTTTCACTTTC-