Information for motif20


Reverse Opposite:

p-value:1e-27
log p-value:-6.267e+01
Information Content per bp:1.953
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets27.1 +/- 12.1bp
Average Position of motif in Background26.4 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TAGGGACC-
GGTTAGAGACCT

MA0056.1_MZF1_1-4/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TAGGGACC
TGGGGA--

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TAGGGACC-
---TGACCT

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TAGGGACC
TCCCNNGGGACN

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TAGGGACC
--CGGAGC

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAGGGACC----
CTACTTGGATACGGAAT

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAGGGACC
GGGCGGGACC

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TAGGGACC---
NNNNTTGGGCACNNCN

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAGGGACC--------
CATAAGACCACCATTAC

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------TAGGGACC---
TGCGCATAGGGGAGGAG