Information for motif21


Reverse Opposite:

p-value:1e-27
log p-value:-6.248e+01
Information Content per bp:1.530
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets25.7 +/- 11.8bp
Average Position of motif in Background23.6 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0161.1_Rxra_2/Jaspar

Match Rank:1
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------CTACGCGA
NNNNCAACCTTCGNGA

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTACGCGA-
NNGCNCTGCGCGGC

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTACGCGA
GGGTACGTGC

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTACGCGA-
-TACGTGCV

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTACGCGA---
GTGCCACGCGACTG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTACGCGA
-CACGCA-

MA0032.1_FOXC1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTACGCGA-
-TACTNNNN

PB0179.1_Sp100_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTACGCGA----
NNTTTANNCGACGNA

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTACGCGA
NCCACGTG-

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTACGCGA---
ACATGCTACCTAATAC