Information for motif23


Reverse Opposite:

p-value:1e-22
log p-value:-5.260e+01
Information Content per bp:1.508
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets21.4 +/- 10.8bp
Average Position of motif in Background16.6 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CATGCCAGAGGG
-ATGCCAGACN-

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CATGCCAGAGGG---
---GCCTCAGGGCAT

MA0003.2_TFAP2A/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CATGCCAGAGGG--
CATTGCCTCAGGGCA

MA0155.1_INSM1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CATGCCAGAGGG--
--TGTCAGGGGGCG

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CATGCCAGAGGG---
---SCCTSAGGSCAW

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CATGCCAGAGGG---
ATTGCCTGAGGCAAT

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CATGCCAGAGGG---
-NTGCCCTAGGGCAA

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CATGCCAGAGGG---
ATTGCCTGAGGCGAA

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATGCCAGAGGG---
ATTCCCTGAGGGGAA

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATGCCAGAGGG---
-CCGCCCAAGGGCAG