Information for motif26


Reverse Opposite:

p-value:1e-20
log p-value:-4.700e+01
Information Content per bp:1.662
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets26.9 +/- 13.3bp
Average Position of motif in Background28.2 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0090.1_TEAD1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GACACATCCC----
--CACATTCCTCCG

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GACACATCCC-
NNGGCGACACCTCNNN

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GACACATCCC---
---RCATTCCWGG

MA0464.1_Bhlhe40/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GACACATCCC-
CTCACGTGCAC

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GACACATCCC
TGACACCT---

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GACACATCCC--
ACCACATCCTGT

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACACATCCC-
GGCCACACCCAN

MA0526.1_USF2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACACATCCC
GGTCACATGAC

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GACACATCCC
GCCACACCCA

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GACACATCCC
KTTCACACCT---