Information for motif27


Reverse Opposite:

p-value:1e-7
log p-value:-1.674e+01
Information Content per bp:1.677
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif14.7
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets25.1 +/- 12.0bp
Average Position of motif in Background33.4 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GCCGGGAGCC
---CGGAGC-

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCGGGAGCC
GGGCGGGACC-

MA0469.1_E2F3/Jaspar

Match Rank:3
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------GCCGGGAGCC
NNGTGNGGGCGGGAG--

MA0471.1_E2F6/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCGGGAGCC
GGGCGGGAAGG

MA0470.1_E2F4/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCGGGAGCC
GGGCGGGAAGG

MA0524.1_TFAP2C/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCGGGAGCC---
TGCCCTGGGGCNANN

MA0024.2_E2F1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCGGGAGCC
CGGGCGGGAGG-

MA0076.2_ELK4/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCGGGAGCC-
NCCGGAAGTGG

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCCGGGAGCC
--AGCGCGCC

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCGGGAGCC
ANCCGGAAGT-