Information for motif28


Reverse Opposite:

p-value:1e-16
log p-value:-3.812e+01
Information Content per bp:1.530
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.3 +/- 15.4bp
Average Position of motif in Background15.7 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0016.1_Cux1_1/Jaspar

Match Rank:1
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GATCTACC---
TNAGNTGATCAACCGGT

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GATCTACC----
AGNGTTCTAATGANN

MA0130.1_ZNF354C/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GATCTACC
-ATCCAC-

MA0032.1_FOXC1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GATCTACC----
----TACTNNNN

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GATCTACC------
ACATGCTACCTAATAC

PB0163.1_Six6_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GATCTACC-----
ATGGGATATATCCGCCT

POL005.1_DPE/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GATCTACC
NACATCTTN-

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GATCTACC-
DGATCRATAN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GATCTACC
YSTTATCT---

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GATCTACC-----
GAAGATCAATCACTTA